RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 HAUS2Q9NVX0 235 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 KCND2Q9NZV8 630 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 PCYOX1Q9UHG3 505 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 RAPGEFL1Q9UHV5 662 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 BLOC1S6Q9UL45 172 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 GINS2Q9Y248 185 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 FRMD4BQ9Y2L6 1034 aa12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 MAFBQ9Y5Q3 323 aaPredicted RBP12.28□□□□□ -0.44
CHRNB1-202ENST00000536404 NPHP3-ACAD11A0A0J9YXS1 232 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 ENO4A6NNW6 628 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 C5orf67F2Z3F1 127 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 MGEA5O60502 916 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 FAM13AO94988 1023 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 CSPG5O95196 566 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 GCNT3O95395 438 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 RB1P06400 928 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 CHN1P15882 459 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 COL9A1P20849 921 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 SH3BGRP55822 239 aaPredicted RBP12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 NFX1Q12986 1120 aaKnown RBP12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 DBN1Q16643 649 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 TIGD5Q53EQ6 642 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 TRMT10CQ7L0Y3 403 aaKnown RBP12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 CATSPER3Q86XQ3 398 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 NPAS4Q8IUM7 802 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 NSMCE1Q8WV22 266 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 KHSRPQ92945 711 aaKnown RBP eCLIP12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 CLP1Q92989 425 aaKnown RBP12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 TBC1D31Q96DN5 1066 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 IFT74Q96LB3 600 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 ZNF317Q96PQ6 595 aaPredicted RBP12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 FTHL17Q9BXU8 183 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 EPHX3Q9H6B9 360 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 ERVK-5Q9HDB9 667 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 TUFT1Q9NNX1 390 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 CD320Q9NPF0 282 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 GABBR1Q9UBS5 961 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 DNAJC12Q9UKB3 198 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 SLC12A4Q9UP95 1085 aa12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 MRPL42Q9Y6G3 142 aaKnown RBP12.27□□□□□ -0.44
CHRNB1-202ENST00000536404 COL1A2P08123 1366 aa12.27□□□□□ -0.45
CHRNB1-202ENST00000536404 RALGAPA2Q2PPJ7 1873 aa12.27□□□□□ -0.45
CHRNB1-202ENST00000536404 H3BQ06 376 aaPredicted RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 KIAA0391O15091 583 aaKnown RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 MSH4O15457 936 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 P4HA2O15460 535 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 ZSCAN9O15535 394 aaPredicted RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 C22orf31O95567 290 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 ATP6V1G2O95670 118 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 PSAPP07602 524 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 RARGP13631 454 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 MAN1A1P33908 653 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 FLT3P36888 993 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 FMO5P49326 533 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 PRPF4BQ13523 1007 aaKnown RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 PAN2Q504Q3 1202 aaKnown RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 CEP128Q6ZU80 1094 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 LNX1Q8TBB1 728 aaPredicted RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 ETNPPLQ8TBG4 499 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 TMEM40Q8WWA1 233 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 MAIP1Q8WWC4 291 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 LZICQ8WZA0 190 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 GJA10Q969M2 543 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 NSUN3Q9H649 340 aaKnown RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 ALG13Q9NP73 1137 aaKnown RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 PCDHA10Q9Y5I2 948 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 MYH9P35579 1960 aaKnown RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 O00370 1275 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 VTNP04004 478 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 RPSAP08865 295 aaKnown RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 KRT13P13646 458 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 IL9P15248 144 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 ELF3P78545 371 aaPredicted RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 CACNB1Q02641 598 aaPredicted RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 DRAP1Q14919 205 aaPredicted RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 E2F5Q15329 346 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 PPP1R7Q15435 360 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 KIZQ2M2Z5 673 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 PTCRAQ6ISU1 281 aaPredicted RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 POTEGQ6S5H5 508 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 SYDE1Q6ZW31 735 aaPredicted RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 TRPM8Q7Z2W7 1104 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 FAM228AQ86W67 206 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 CMTR2Q8IYT2 770 aaKnown RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 TRIM51Q9BSJ1 452 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 C11orf84Q9BUA3 381 aaPredicted RBP12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 NOD2Q9HC29 1040 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 APEX2Q9UBZ4 518 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 ST3GAL5Q9UNP4 418 aa12.26□□□□□ -0.45
CHRNB1-202ENST00000536404 ATG2AQ2TAZ0 1938 aa12.25□□□□□ -0.45
CHRNB1-202ENST00000536404 RASGRF2O14827 1237 aa12.25□□□□□ -0.45
CHRNB1-202ENST00000536404 ZNF862O60290 1169 aa12.25□□□□□ -0.45
CHRNB1-202ENST00000536404 SKAP2O75563 359 aaPredicted RBP12.25□□□□□ -0.45
CHRNB1-202ENST00000536404 SUN1O94901 812 aa12.25□□□□□ -0.45
CHRNB1-202ENST00000536404 VIMP08670 466 aaKnown RBP12.25□□□□□ -0.45
CHRNB1-202ENST00000536404 STAG3L1P0CL83 205 aa12.25□□□□□ -0.45
CHRNB1-202ENST00000536404 DNAJB1P25685 340 aa12.25□□□□□ -0.45
CHRNB1-202ENST00000536404 CTNNA2P26232 953 aa12.25□□□□□ -0.45
CHRNB1-202ENST00000536404 CASP5P51878 434 aa12.25□□□□□ -0.45
CHRNB1-202ENST00000536404 PLTPP55058 493 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms