RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 WDR93Q6P2C0 686 aa22.16■■□□□ 1.14
PDXDC1-205ENST00000535621 XYLT1Q86Y38 959 aa22.16■■□□□ 1.14
PDXDC1-205ENST00000535621 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.16■■□□□ 1.14
PDXDC1-205ENST00000535621 PAAF1Q9BRP4 392 aa22.16■■□□□ 1.14
PDXDC1-205ENST00000535621 SNX25Q9H3E2 840 aa22.16■■□□□ 1.14
PDXDC1-205ENST00000535621 TMEM39AQ9NV64 488 aa22.16■■□□□ 1.14
PDXDC1-205ENST00000535621 MICAL3Q7RTP6 2002 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 CYB561D2O14569 222 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 TUBBP07437 444 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 PDGFRBP09619 1106 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 WARSP23381 471 aaKnown RBP22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 MAN1A1P33908 653 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 ARHGAP17Q68EM7 881 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 DCUN1D2Q6PH85 259 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 TTC30AQ86WT1 665 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 C3orf58Q8NDZ4 430 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 VWCEQ96DN2 955 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 LPIN3Q9BQK8 851 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 AP1M1Q9BXS5 423 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 SYNCQ9H7C4 482 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 WDR35Q9P2L0 1181 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 IP6K2Q9UHH9 426 aa22.15■■□□□ 1.14
PDXDC1-205ENST00000535621 CCDC151A5D8V7 595 aa22.14■■□□□ 1.14
PDXDC1-205ENST00000535621 PYGMP11217 842 aa22.14■■□□□ 1.14
PDXDC1-205ENST00000535621 RPL9P32969 192 aaKnown RBP22.14■■□□□ 1.14
PDXDC1-205ENST00000535621 RWDD2BP57060 319 aa22.14■■□□□ 1.14
PDXDC1-205ENST00000535621 PSMC1P62191 440 aaKnown RBP22.14■■□□□ 1.14
PDXDC1-205ENST00000535621 ZNF252P-AS1Q0IIN9 211 aa22.14■■□□□ 1.14
PDXDC1-205ENST00000535621 UPP1Q16831 310 aa22.14■■□□□ 1.14
PDXDC1-205ENST00000535621 DAB2IPQ5VWQ8 1189 aa22.14■■□□□ 1.14
PDXDC1-205ENST00000535621 CCDC70Q6NSX1 233 aa22.14■■□□□ 1.14
PDXDC1-205ENST00000535621 AADACL2Q6P093 401 aa22.14■■□□□ 1.14
PDXDC1-205ENST00000535621 SLC24A5Q71RS6 500 aa22.14■■□□□ 1.14
PDXDC1-205ENST00000535621 HDAC7Q8WUI4 952 aa22.14■■□□□ 1.14
PDXDC1-205ENST00000535621 TTC3P53804 2025 aa22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 CASTOR2A6NHX0 329 aa22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 SIGLEC16A6NMB1 481 aa22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 KRIT1O00522 736 aa22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 CLTBP09497 229 aa22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 FAM163BP0C2L3 166 aa22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 OGDHQ02218 1023 aa22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 ZNF268Q14587 947 aaPredicted RBP22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 BRD3Q15059 726 aa22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 CLLU1OSQ5K130 101 aa22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 NECAB2Q7Z6G3 386 aa22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 OSTM1Q86WC4 334 aa22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 SENP8Q96LD8 212 aa22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 PRDM5Q9NQX1 630 aaPredicted RBP22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 LCMT1Q9UIC8 334 aa22.14■■□□□ 1.13
PDXDC1-205ENST00000535621 ENPP3O14638 875 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 B4GALT3O60512 393 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 GRIK3Q13003 919 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 CLUL1Q15846 466 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 LONRF2Q1L5Z9 754 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 GLE1Q53GS7 698 aaKnown RBP22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 WSCD1Q658N2 575 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 C8orf74Q6P047 294 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 KRT12Q99456 494 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 NAP1L3Q99457 506 aaPredicted RBP22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 TRIM43BA6NCK2 446 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 GOLGA8SH3BPF8 625 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 CCDC188H7C350 402 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 GABRDO14764 452 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 INPPL1O15357 1258 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 KRT3P12035 628 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 GATMP50440 423 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 MRPS25P82663 173 aaKnown RBP22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 SLC35F5Q8WV83 523 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 TRIM43Q96BQ3 446 aaPredicted RBP22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 MCRS1Q96EZ8 462 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 ST7Q9NRC1 585 aa22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 DMGDHQ9UI17 866 aaKnown RBP22.13■■□□□ 1.13
PDXDC1-205ENST00000535621 EOMESO95936 686 aa22.12■■□□□ 1.13
PDXDC1-205ENST00000535621 RFC1P35251 1148 aaPredicted RBP22.12■■□□□ 1.13
PDXDC1-205ENST00000535621 AARSP49588 968 aaKnown RBP eCLIP22.12■■□□□ 1.13
PDXDC1-205ENST00000535621 TAS2R40P59535 323 aa22.12■■□□□ 1.13
PDXDC1-205ENST00000535621 FAM189BP81408 668 aa22.12■■□□□ 1.13
PDXDC1-205ENST00000535621 PMF1Q6P1K2 205 aa22.12■■□□□ 1.13
PDXDC1-205ENST00000535621 IPO4Q8TEX9 1081 aaKnown RBP22.12■■□□□ 1.13
PDXDC1-205ENST00000535621 SEPT8Q92599 483 aa22.12■■□□□ 1.13
PDXDC1-205ENST00000535621 DDX27Q96GQ7 796 aaKnown RBP22.12■■□□□ 1.13
PDXDC1-205ENST00000535621 TNIP3Q96KP6 325 aa22.12■■□□□ 1.13
PDXDC1-205ENST00000535621 PRDM10Q9NQV6 1147 aa22.12■■□□□ 1.13
PDXDC1-205ENST00000535621 ZNF446Q9NWS9 450 aa22.12■■□□□ 1.13
PDXDC1-205ENST00000535621 HESX1Q9UBX0 185 aa22.12■■□□□ 1.13
PDXDC1-205ENST00000535621 NR2E1Q9Y466 385 aa22.12■■□□□ 1.13
PDXDC1-205ENST00000535621 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.11■■□□□ 1.13
PDXDC1-205ENST00000535621 TULP2O00295 520 aa22.11■■□□□ 1.13
PDXDC1-205ENST00000535621 PSTPIP1O43586 416 aa22.11■■□□□ 1.13
PDXDC1-205ENST00000535621 SETSIPP0DME0 302 aa22.11■■□□□ 1.13
PDXDC1-205ENST00000535621 CCDC130P13994 396 aa22.11■■□□□ 1.13
PDXDC1-205ENST00000535621 SEL1L2Q5TEA6 688 aa22.11■■□□□ 1.13
PDXDC1-205ENST00000535621 MTERF4Q7Z6M4 381 aaKnown RBP22.11■■□□□ 1.13
PDXDC1-205ENST00000535621 KLHL7Q8IXQ5 586 aa22.11■■□□□ 1.13
PDXDC1-205ENST00000535621 NIPA2Q8N8Q9 360 aa22.11■■□□□ 1.13
PDXDC1-205ENST00000535621 JOSD2Q8TAC2 188 aa22.11■■□□□ 1.13
PDXDC1-205ENST00000535621 FTHL17Q9BXU8 183 aa22.11■■□□□ 1.13
PDXDC1-205ENST00000535621 DNAI2Q9GZS0 605 aa22.11■■□□□ 1.13
PDXDC1-205ENST00000535621 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.11■■□□□ 1.13
PDXDC1-205ENST00000535621 E5RJQ4 531 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms