RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 KIF18AQ8NI77 898 aa24.26■■□□□ 1.47
RBFOX1-206ENST00000535565 SLC2A14Q8TDB8 520 aa24.26■■□□□ 1.47
RBFOX1-206ENST00000535565 HERVK_113Q902F9 699 aa24.26■■□□□ 1.47
RBFOX1-206ENST00000535565 HNRNPABQ99729 332 aaKnown RBP24.26■■□□□ 1.47
RBFOX1-206ENST00000535565 LPIN3Q9BQK8 851 aa24.26■■□□□ 1.47
RBFOX1-206ENST00000535565 UVRAGQ9P2Y5 699 aa24.26■■□□□ 1.47
RBFOX1-206ENST00000535565 STRIP2Q9ULQ0 834 aa24.26■■□□□ 1.47
RBFOX1-206ENST00000535565 CAPN6Q9Y6Q1 641 aa24.26■■□□□ 1.47
RBFOX1-206ENST00000535565 ATMINO43313 823 aaPredicted RBP24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 LAG3P18627 525 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 CASQ1P31415 396 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 PBX3P40426 434 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 SLC8A3P57103 927 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 BST2Q10589 180 aaKnown RBP24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 TCEAL1Q15170 157 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 INTS6LQ5JSJ4 861 aaKnown RBP24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 KIAA0319Q5VV43 1072 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 MYCBPAPQ8TBZ2 947 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 ZNF558Q96NG5 402 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 WDR24Q96S15 920 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 RTP3Q9BQQ7 232 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 MED10Q9BTT4 135 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 MIS12Q9H081 205 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 SYNCQ9H7C4 482 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 CRTAC1Q9NQ79 661 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 KIAA1671Q9BY89 1806 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 CAPN15O75808 1086 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 OAZ2O95190 189 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 GJB5O95377 273 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 PDCLQ13371 301 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 MAPRE1Q15691 268 aaKnown RBP24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 PKDCCQ504Y2 493 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 KCNT2Q6UVM3 1135 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 TTC30AQ86WT1 665 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 CEP57Q86XR8 500 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 IPO4Q8TEX9 1081 aaKnown RBP24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 SLC9A7Q96T83 725 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 ZBED2Q9BTP6 218 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 GPR62Q9BZJ7 368 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 SCINQ9Y6U3 715 aa24.25■■□□□ 1.47
RBFOX1-206ENST00000535565 FGFR3P22607 806 aa24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 RRM1P23921 792 aa24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 HADHBP55084 474 aaKnown RBP24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 SNX16P57768 344 aa24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 PLCB3Q01970 1234 aa24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 PTP4A2Q12974 167 aa24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 VARS2Q5ST30 1063 aaKnown RBP24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 FUKQ8N0W3 1084 aa24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 NUP85Q9BW27 656 aa24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 MRPL47Q9HD33 250 aaKnown RBP24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 OSGEPQ9NPF4 335 aa24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 CYTH4Q9UIA0 394 aa24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 PCDHGC5Q9Y5F6 944 aa24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 MRPL42Q9Y6G3 142 aaKnown RBP24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 SLC4A7Q9Y6M7 1214 aa24.24■■□□□ 1.47
RBFOX1-206ENST00000535565 MYBPHLA2RUH7 354 aa24.23■■□□□ 1.47
RBFOX1-206ENST00000535565 PTPN20Q4JDL3 420 aa24.23■■□□□ 1.47
RBFOX1-206ENST00000535565 C2CD6Q53TS8 623 aa24.23■■□□□ 1.47
RBFOX1-206ENST00000535565 ZNF280DQ6N043 979 aa24.23■■□□□ 1.47
RBFOX1-206ENST00000535565 TMEM173Q86WV6 379 aaPredicted RBP24.23■■□□□ 1.47
RBFOX1-206ENST00000535565 TPCN2Q8NHX9 752 aa24.23■■□□□ 1.47
RBFOX1-206ENST00000535565 ZNF564Q8TBZ8 553 aaPredicted RBP24.23■■□□□ 1.47
RBFOX1-206ENST00000535565 PHOSPHO2Q8TCD6 241 aa24.23■■□□□ 1.47
RBFOX1-206ENST00000535565 C18orf8Q96DM3 657 aa24.23■■□□□ 1.47
RBFOX1-206ENST00000535565 IGSF21Q96ID5 467 aa24.23■■□□□ 1.47
RBFOX1-206ENST00000535565 ST7Q9NRC1 585 aa24.23■■□□□ 1.47
RBFOX1-206ENST00000535565 AAASQ9NRG9 546 aa24.23■■□□□ 1.47
RBFOX1-206ENST00000535565 CXXC1Q9P0U4 656 aaPredicted RBP24.23■■□□□ 1.47
RBFOX1-206ENST00000535565 CTAGE9A4FU28 777 aa24.22■■□□□ 1.47
RBFOX1-206ENST00000535565 MTA2O94776 668 aa24.22■■□□□ 1.47
RBFOX1-206ENST00000535565 PDE4CQ08493 712 aa24.22■■□□□ 1.47
RBFOX1-206ENST00000535565 FAM171BQ6P995 826 aa24.22■■□□□ 1.47
RBFOX1-206ENST00000535565 SYCE1Q8N0S2 351 aa24.22■■□□□ 1.47
RBFOX1-206ENST00000535565 OR10T2Q8NGX3 314 aa24.22■■□□□ 1.47
RBFOX1-206ENST00000535565 STK32AQ8WU08 396 aa24.22■■□□□ 1.47
RBFOX1-206ENST00000535565 PCED1BQ96HM7 432 aa24.22■■□□□ 1.47
RBFOX1-206ENST00000535565 CPXM1Q96SM3 734 aa24.22■■□□□ 1.47
RBFOX1-206ENST00000535565 DUSP16Q9BY84 665 aa24.22■■□□□ 1.47
RBFOX1-206ENST00000535565 B3GNT5Q9BYG0 378 aa24.22■■□□□ 1.47
RBFOX1-206ENST00000535565 PARVAQ9NVD7 372 aa24.22■■□□□ 1.47
RBFOX1-206ENST00000535565 WDR35Q9P2L0 1181 aa24.22■■□□□ 1.47
RBFOX1-206ENST00000535565 INSL6Q9Y581 213 aa24.22■■□□□ 1.47
RBFOX1-206ENST00000535565 PALMO75781 387 aa24.21■■□□□ 1.47
RBFOX1-206ENST00000535565 FAM200BP0CF97 657 aa24.21■■□□□ 1.47
RBFOX1-206ENST00000535565 HTRA4P83105 476 aaPredicted RBP24.21■■□□□ 1.47
RBFOX1-206ENST00000535565 FAM35AQ86V20 835 aa24.21■■□□□ 1.47
RBFOX1-206ENST00000535565 DCP1BQ8IZD4 617 aaKnown RBP24.21■■□□□ 1.47
RBFOX1-206ENST00000535565 COLGALT1Q8NBJ5 622 aa24.21■■□□□ 1.47
RBFOX1-206ENST00000535565 BCL7CQ8WUZ0 217 aaPredicted RBP24.21■■□□□ 1.47
RBFOX1-206ENST00000535565 SLC35F5Q8WV83 523 aa24.21■■□□□ 1.47
RBFOX1-206ENST00000535565 TMEM169Q96HH4 297 aa24.21■■□□□ 1.47
RBFOX1-206ENST00000535565 NAPGQ99747 312 aaPredicted RBP24.21■■□□□ 1.47
RBFOX1-206ENST00000535565 TTPALQ9BTX7 342 aa24.21■■□□□ 1.47
RBFOX1-206ENST00000535565 COG5Q9UP83 839 aa24.21■■□□□ 1.47
RBFOX1-206ENST00000535565 NLRC5Q86WI3 1866 aa24.21■■□□□ 1.47
RBFOX1-206ENST00000535565 PTPRDP23468 1912 aa24.21■■□□□ 1.47
RBFOX1-206ENST00000535565 GRID2IPA4D2P6 1211 aa24.2■■□□□ 1.47
RBFOX1-206ENST00000535565 H7C4K7 107 aa24.2■■□□□ 1.47
RBFOX1-206ENST00000535565 CLDN5O00501 218 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms