RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 CACNA2D1P54289 1103 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 SWSAP1Q6NVH7 229 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 SCARA5Q6ZMJ2 495 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 TREML1Q86YW5 311 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 RCOR2Q8IZ40 523 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 EMC1Q8N766 993 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 DCAKDQ8WVC6 231 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 CLEC4DQ8WXI8 215 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 SLC13A1Q9BZW2 595 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 LNPEPQ9UIQ6 1025 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 KLRG2A4D1S0 409 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-214ENST00000535493 FCHO1O14526 889 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 MT-ND3P03897 115 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 DLDP09622 509 aaKnown RBP14.06□□□□□ -0.16
HDAC4-214ENST00000535493 RPL22P35268 128 aaKnown RBP14.06□□□□□ -0.16
HDAC4-214ENST00000535493 PGM1P36871 562 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 IRX4P78413 519 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 SLC34A1Q06495 639 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 KBTBD12Q3ZCT8 623 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 ZACNQ401N2 412 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 TFDP3Q5H9I0 405 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 TLE6Q9H808 572 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.06□□□□□ -0.168e-6■■■□□ 14.7
HDAC4-214ENST00000535493 SENP1Q9P0U3 644 aa14.06□□□□□ -0.16
HDAC4-214ENST00000535493 SCN9AQ15858 1988 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 TMEM191CA6NGB0 347 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 C4BPAP04003 597 aaKnown RBP14.05□□□□□ -0.16
HDAC4-214ENST00000535493 TMEM191BP0C7N4 346 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 IL1R2P27930 398 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 CDKN2BP42772 138 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 RAB27AP51159 221 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 LMNB2Q03252 620 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 CES4AQ5XG92 561 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 PRPF39Q86UA1 669 aaKnown RBP14.05□□□□□ -0.16
HDAC4-214ENST00000535493 C4orf19Q8IY42 314 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 SYTL5Q8TDW5 730 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-214ENST00000535493 MZB1Q8WU39 189 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 TRIM11Q96F44 468 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 ST6GALNAC4Q9H4F1 302 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 SEPT9Q9UHD8 586 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-214ENST00000535493 SLC24A2Q9UI40 661 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 XPO7Q9UIA9 1087 aaKnown RBP14.05□□□□□ -0.16
HDAC4-214ENST00000535493 SCOCQ9UIL1 159 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 USP21Q9UK80 565 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 ZNRF3Q9ULT6 936 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 ZBTB12Q9Y330 459 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-214ENST00000535493 AHCYL1O43865 530 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 WEE2P0C1S8 567 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 CAP2P40123 477 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 ELK3P41970 407 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 SERPINB4P48594 390 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 HSD17B4P51659 736 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 PTK7Q13308 1070 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 RASA2Q15283 850 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 MTERF2Q49AM1 385 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 HSF5Q4G112 596 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-214ENST00000535493 FAXCQ5TGI0 409 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 DNAJC24Q6P3W2 148 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 ADGRD1Q6QNK2 874 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 C15orf39Q6ZRI6 1047 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 CTAGE3PQ8IX95 158 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 KIAA0319LQ8IZA0 1049 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 RBM41Q96IZ5 413 aaKnown RBP14.05□□□□□ -0.16
HDAC4-214ENST00000535493 RMDN3Q96TC7 470 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 SHCBP1LQ9BZQ2 653 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 XPNPEP1Q9NQW7 623 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 SAR1AQ9NR31 198 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 IP6K2Q9UHH9 426 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 ASB3Q9Y575 518 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 UBIAD1Q9Y5Z9 338 aa14.05□□□□□ -0.16
HDAC4-214ENST00000535493 MEI4A8MW99 385 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 CALRP27797 417 aaKnown RBP14.04□□□□□ -0.16
HDAC4-214ENST00000535493 YWHAGP61981 247 aaKnown RBP eCLIP14.04□□□□□ -0.16
HDAC4-214ENST00000535493 CDK16Q00536 496 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 RBBP5Q15291 538 aaKnown RBP14.04□□□□□ -0.16
HDAC4-214ENST00000535493 CCDC142Q17RM4 750 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 CCDC62Q6P9F0 684 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 NPNTQ6UXI9 565 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 RSAD2Q8WXG1 361 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 SKA1Q96BD8 255 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 ACAP3Q96P50 834 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 THTPAQ9BU02 230 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 ZNF341Q9BYN7 854 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 ARHGEF4Q9NR80 690 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 SERPINA10Q9UK55 444 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 LRCH1Q9Y2L9 728 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 TTLL13PA6NNM8 815 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 WDR64B1ANS9 1081 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 PIK3R2O00459 728 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 SORBS2O94875 1100 aaKnown RBP14.04□□□□□ -0.16
HDAC4-214ENST00000535493 NPTXRO95502 500 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 SKIP12755 728 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 ETS2P15036 469 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 NPR1P16066 1061 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 MMP8P22894 467 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 RFC1P35251 1148 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-214ENST00000535493 BMPR2Q13873 1038 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 PGM5Q15124 567 aa14.04□□□□□ -0.16
HDAC4-214ENST00000535493 CWF19L1Q69YN2 538 aaKnown RBP14.04□□□□□ -0.16
HDAC4-214ENST00000535493 ZCCHC23Q6ZST2 131 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms