RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 HMGA1P17096 107 aaKnown RBP9□□□□□ -0.97
CLIP1-206ENST00000535290 EIF2S3P41091 472 aaKnown RBP9□□□□□ -0.97
CLIP1-206ENST00000535290 IFNAR2P48551 515 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 TUFMP49411 452 aaKnown RBP9□□□□□ -0.97
CLIP1-206ENST00000535290 AARSP49588 968 aaKnown RBP eCLIP9□□□□□ -0.97
CLIP1-206ENST00000535290 MRPS21P82921 87 aaKnown RBP9□□□□□ -0.97
CLIP1-206ENST00000535290 KCNC4Q03721 635 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 SPAG1Q07617 926 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 BYSLQ13895 437 aaKnown RBP9□□□□□ -0.97
CLIP1-206ENST00000535290 ZNF268Q14587 947 aaPredicted RBP9□□□□□ -0.97
CLIP1-206ENST00000535290 ZNF77Q15935 545 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 TAF12Q16514 161 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 SLC10A6Q3KNW5 377 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 PLEKHG6Q3KR16 790 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 TSGA10IPQ3SY00 556 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 ZNF568Q3ZCX4 644 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 EARS2Q5JPH6 523 aaKnown RBP9□□□□□ -0.97
CLIP1-206ENST00000535290 OVOS1Q6IE37 1185 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 APBB1IPQ7Z5R6 666 aaPredicted RBP9□□□□□ -0.97
CLIP1-206ENST00000535290 SLFN12Q8IYM2 578 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 PDCD7Q8N8D1 485 aaKnown RBP9□□□□□ -0.97
CLIP1-206ENST00000535290 TRIML1Q8N9V2 468 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 STKLD1Q8NE28 680 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 SETD7Q8WTS6 366 aaKnown RBP9□□□□□ -0.97
CLIP1-206ENST00000535290 ATP2A3Q93084 1043 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 PNMA5Q96PV4 448 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 NACC1Q96RE7 527 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 SLC22A12Q96S37 553 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 CYP2S1Q96SQ9 504 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 ACO2Q99798 780 aaKnown RBP9□□□□□ -0.97
CLIP1-206ENST00000535290 PRDM16Q9HAZ2 1276 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 IGSF5Q9NSI5 407 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 HSFX1Q9UBD0 423 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 PTPRBP23467 1997 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 TNRC6BQ9UPQ9 1833 aaKnown RBP9□□□□□ -0.97
CLIP1-206ENST00000535290 NOTCH2Q04721 2471 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 GOLGA8CPA6NN73 597 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 K7ERI5 159 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 ABLIM1O14639 778 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 TLX3O43711 291 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-206ENST00000535290 PPP1R37O75864 691 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 BAG4O95429 457 aaKnown RBP8.99□□□□□ -0.97
CLIP1-206ENST00000535290 CYP11B2P19099 503 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 DDX6P26196 483 aaKnown RBP eCLIP8.99□□□□□ -0.97
CLIP1-206ENST00000535290 SLC6A11P48066 632 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 GUCY2FP51841 1108 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 EFNA5P52803 228 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 FAM160A1Q05DH4 1040 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 GRIK2Q13002 908 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 NR1H3Q13133 447 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 DMP1Q13316 513 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-206ENST00000535290 AAMPQ13685 434 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 SLC39A12Q504Y0 691 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 SEZ6Q53EL9 994 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 GALNT17Q6IS24 598 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 ARMCX5Q6P1M9 558 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 PADI6Q6TGC4 694 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 DSTYKQ6XUX3 929 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 PIK3AP1Q6ZUJ8 805 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 BAHD1Q8TBE0 780 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-206ENST00000535290 OXER1Q8TDS5 423 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 MRPS31Q92665 395 aaKnown RBP8.99□□□□□ -0.97
CLIP1-206ENST00000535290 HSPA12BQ96MM6 686 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 TARS2Q9BW92 718 aaKnown RBP8.99□□□□□ -0.97
CLIP1-206ENST00000535290 IL21RQ9HBE5 538 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 PCDHA12Q9UN75 941 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 CABIN1Q9Y6J0 2220 aa8.99□□□□□ -0.97
CLIP1-206ENST00000535290 IGHV1OR15-9A0A0B4J2B8 117 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 FAM205CA6NFA0 338 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 CAPN8A6NHC0 703 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 PPEF2O14830 753 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 TADA3O75528 432 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 MCF2P10911 925 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 HAPLN1P10915 354 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-206ENST00000535290 HARSP12081 509 aaKnown RBP8.98□□□□□ -0.97
CLIP1-206ENST00000535290 TYMPP19971 482 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 PROZP22891 400 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 MAOBP27338 520 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 PDIA3P30101 505 aaKnown RBP8.98□□□□□ -0.97
CLIP1-206ENST00000535290 LRPAP1P30533 357 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 KIR2DL1P43626 348 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-206ENST00000535290 GPR15P49685 360 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 SSRP1Q08945 709 aaKnown RBP8.98□□□□□ -0.97
CLIP1-206ENST00000535290 SCRN1Q12765 414 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 USP4Q13107 963 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 PPP2R5AQ15172 486 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 E2F4Q16254 413 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 ZC2HC1CQ53FD0 456 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-206ENST00000535290 EOGTQ5NDL2 527 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 SDHAF4Q5VUM1 108 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 SLC36A4Q6YBV0 504 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 TAS1R3Q7RTX0 852 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 GPR155Q7Z3F1 870 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 LRRTM3Q86VH5 581 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 CATSPER3Q86XQ3 398 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 TRIM22Q8IYM9 498 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 GALNT15Q8N3T1 639 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 FAM181AQ8N9Y4 354 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 SH3RF2Q8TEC5 729 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 LRRC15Q8TF66 581 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms