RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 PACSIN3Q9UKS6 424 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 SMCHD1A6NHR9 2005 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 GSC2O15499 205 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 SAT1P21673 171 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 SP100P23497 879 aaPredicted RBP16.65■□□□□ 0.26
MCF2L-232ENST00000535094 AQP5P55064 265 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 FNBP1LQ5T0N5 605 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 LGSNQ5TDP6 509 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 FAM160B2Q86V87 743 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 PPIL6Q8IXY8 311 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 SLITRK1Q96PX8 696 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 FBXO40Q9UH90 709 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 LRCH1Q9Y2L9 728 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 TBX10O75333 385 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 ALADP13716 330 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 CDH6P55285 790 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 ZBTB41Q5SVQ8 909 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 RINLQ6ZS11 566 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 SEPT12Q8IYM1 358 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 ANKLE1Q8NAG6 615 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 PTPRN2Q92932 1015 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 MOV10L1Q9BXT6 1211 aaKnown RBP16.65■□□□□ 0.26
MCF2L-232ENST00000535094 ARAP2Q8WZ64 1704 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 POLRMTO00411 1230 aaKnown RBP16.64■□□□□ 0.26
MCF2L-232ENST00000535094 MTA2O94776 668 aa16.64■□□□□ 0.26
MCF2L-232ENST00000535094 T-ENOLP0DO92 83 aa16.64■□□□□ 0.26
MCF2L-232ENST00000535094 CRY2Q49AN0 593 aa16.64■□□□□ 0.26
MCF2L-232ENST00000535094 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.64■□□□□ 0.26
MCF2L-232ENST00000535094 RABGAP1LQ5R372 815 aa16.64■□□□□ 0.26
MCF2L-232ENST00000535094 TDRD10Q5VZ19 366 aaKnown RBP16.64■□□□□ 0.26
MCF2L-232ENST00000535094 KATNAL2Q8IYT4 538 aa16.64■□□□□ 0.26
MCF2L-232ENST00000535094 SLC7A3Q8WY07 619 aa16.64■□□□□ 0.26
MCF2L-232ENST00000535094 ASTN2O75129 1339 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-232ENST00000535094 KBTBD13C9JR72 458 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 KRT37O76014 449 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 STK10O94804 968 aaKnown RBP16.64■□□□□ 0.25
MCF2L-232ENST00000535094 AMPD1P23109 780 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 GDF10P55107 478 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 NFIL3Q16649 462 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 PLEKHG4Q58EX7 1191 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 OR5B17Q8NGF7 314 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 PIP4K2CQ8TBX8 421 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 MTO1Q9Y2Z2 717 aaKnown RBP16.64■□□□□ 0.25
MCF2L-232ENST00000535094 ACTL7BQ9Y614 415 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 PAPPAQ13219 1627 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 C2CD2LO14523 706 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 ACVR2BQ13705 512 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 STRIP1Q5VSL9 837 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 NDUFAF2Q8N183 169 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 PYDC1Q8WXC3 89 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 TUBB6Q9BUF5 446 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 AVENQ9NQS1 362 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-232ENST00000535094 TMX2Q9Y320 296 aa16.64■□□□□ 0.25
MCF2L-232ENST00000535094 KIF3CO14782 793 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 CALB1P05937 261 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 NOMO3P69849 1222 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 PDE1BQ01064 536 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 GCNT1Q02742 428 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 MSS51Q4VC12 460 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 NPNTQ6UXI9 565 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 DDX1Q92499 740 aaKnown RBP16.63■□□□□ 0.25
MCF2L-232ENST00000535094 USP6NLQ92738 828 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 OXNAD1Q96HP4 312 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-232ENST00000535094 MIPEPQ99797 713 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 TAS2R1Q9NYW7 299 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 NUB1Q9Y5A7 615 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 DOT1LQ8TEK3 1739 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 SYNJ2BP-COX16A0A087WUM0 186 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 CYB561D2O14569 222 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 CFLARO15519 480 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 TRPA1O75762 1119 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 PDE5AO76074 875 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 UNGP13051 313 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-232ENST00000535094 POLR2BP30876 1174 aaKnown RBP16.63■□□□□ 0.25
MCF2L-232ENST00000535094 HIRAP54198 1017 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-232ENST00000535094 AP2B1P63010 937 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 KRT76Q01546 638 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 PRKCEQ02156 737 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 GRIK3Q13003 919 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 ANO5Q75V66 913 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 ALLCQ8N6M5 410 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 MTMR12Q9C0I1 747 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 COX16Q9P0S2 106 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 SLC24A2Q9UI40 661 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 FEM1BQ9UK73 627 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 MYPNQ86TC9 1320 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 TCRBV7S3A2A0A539 114 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 KCNN4O15554 427 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 JAK3P52333 1124 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 PPP1R15BQ5SWA1 713 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 OR6B2Q6IFH4 312 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 MAP4K3Q8IVH8 894 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 UNC45BQ8IWX7 931 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 ZC3H7BQ9UGR2 993 aaKnown RBP16.63■□□□□ 0.25
MCF2L-232ENST00000535094 GINS2Q9Y248 185 aa16.63■□□□□ 0.25
MCF2L-232ENST00000535094 TP73O15350 636 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 CHRM1P11229 460 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-232ENST00000535094 RPL22P35268 128 aaKnown RBP16.62■□□□□ 0.25
MCF2L-232ENST00000535094 SPP2Q13103 211 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 TATDN1Q6P1N9 297 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms