RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 EDRF1Q3B7T1 1238 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 GAREM2Q75VX8 874 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 CMTM8Q8IZV2 173 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 FAM3CQ92520 227 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 SECISBP2LQ93073 1101 aaKnown RBP11.12□□□□□ -0.63
CSDE1-217ENST00000534699 SEPT5Q99719 369 aaPredicted RBP11.12□□□□□ -0.63
CSDE1-217ENST00000534699 RPP25Q9BUL9 199 aaKnown RBP11.12□□□□□ -0.63
CSDE1-217ENST00000534699 CRISPLD1Q9H336 500 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 PCIF1Q9H4Z3 704 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 CYP3A43Q9HB55 503 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 SERTAD1Q9UHV2 236 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 LAMA2P24043 3122 aaKnown RBP11.12□□□□□ -0.63
CSDE1-217ENST00000534699 SLC38A8A6NNN8 435 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 PI15O43692 258 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 EXOC3O60645 756 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 ATG13O75143 517 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 OR4Q2P0C623 313 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 TNNI1P19237 187 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 FBXO43Q4G163 708 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 INTS8Q75QN2 995 aaKnown RBP11.12□□□□□ -0.63
CSDE1-217ENST00000534699 LRRTM3Q86VH5 581 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 CBWD2Q8IUF1 395 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 ARID3BQ8IVW6 561 aaPredicted RBP11.12□□□□□ -0.63
CSDE1-217ENST00000534699 PARD3BQ8TEW8 1205 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 KCTD10Q9H3F6 313 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 FOXD4L1Q9NU39 408 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 FRMD4BQ9Y2L6 1034 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 ANAPC1Q9H1A4 1944 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 TRAV19A0A0A6YYK7 116 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 A0A1W2PRU2 124 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 LRP3O75074 770 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 KRT19P08727 400 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 TUBP50607 506 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 ITPRIPL2Q3MIP1 535 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 KMT5BQ4FZB7 885 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 SPEM1Q8N4L4 309 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 ZNF276Q8N554 614 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 ZBTB44Q8NCP5 570 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 PGLYRP2Q96PD5 576 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 ABI2Q9NYB9 513 aaPredicted RBP11.11□□□□□ -0.63
CSDE1-217ENST00000534699 GOLGA8IPA6NC78 632 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 GOLGA8JA6NMD2 632 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 SLC9A3R1O14745 358 aaPredicted RBP11.11□□□□□ -0.63
CSDE1-217ENST00000534699 KINO60870 393 aaKnown RBP11.11□□□□□ -0.63
CSDE1-217ENST00000534699 AKAP3O75969 853 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 LMNAP02545 664 aaKnown RBP11.11□□□□□ -0.63
CSDE1-217ENST00000534699 GNL1P36915 607 aaPredicted RBP11.11□□□□□ -0.63
CSDE1-217ENST00000534699 NR1H3Q13133 447 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 CUL4BQ13620 913 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 SNX30Q5VWJ9 437 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 TMEM209Q96SK2 561 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 FGFBP2Q9BYJ0 223 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 SLC27A5Q9Y2P5 690 aa11.11□□□□□ -0.63
CSDE1-217ENST00000534699 H0Y858 1186 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 C4BPAP04003 597 aaKnown RBP11.1□□□□□ -0.63
CSDE1-217ENST00000534699 AVPR1AP37288 418 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 FAM160A1Q05DH4 1040 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 USP4Q13107 963 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 UBXN2BQ14CS0 331 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 HSF5Q4G112 596 aaPredicted RBP11.1□□□□□ -0.63
CSDE1-217ENST00000534699 PREPLQ4J6C6 727 aaPredicted RBP11.1□□□□□ -0.63
CSDE1-217ENST00000534699 KRBA2Q6ZNG9 492 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 OSTM1Q86WC4 334 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 CPA6Q8N4T0 437 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 KBTBD7Q8WVZ9 684 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 OTUB2Q96DC9 234 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 SLITRK6Q9H5Y7 841 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 PNPLA8Q9NP80 782 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 SPATA6Q9NWH7 488 aaPredicted RBP11.1□□□□□ -0.63
CSDE1-217ENST00000534699 IL37Q9NZH6 218 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 ARHGAP26Q9UNA1 814 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 PIAS3Q9Y6X2 628 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 REV3LO60673 3130 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 CHURC1-FNTBB4DL54 471 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 TARSP26639 723 aaKnown RBP11.1□□□□□ -0.63
CSDE1-217ENST00000534699 DPYDQ12882 1025 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 FZD5Q13467 585 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 ZNF667Q5HYK9 610 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 CCDC150Q8NCX0 1101 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 OR5B17Q8NGF7 314 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 ZSWIM3Q96MP5 696 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 GSDMAQ96QA5 445 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 TDP1Q9NUW8 608 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 KIAA1549LQ6ZVL6 1849 aa11.1□□□□□ -0.63
CSDE1-217ENST00000534699 CDH23Q9H251 3354 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 TRDMT1O14717 391 aaKnown RBP11.09□□□□□ -0.63
CSDE1-217ENST00000534699 PHACTR2O75167 634 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 NR3C1P04150 777 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 WNT7BP56706 349 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 SLC7A9P82251 487 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 E2F5Q15329 346 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 ZACNQ401N2 412 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 CRYBG2Q8N1P7 616 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 FAM83CQ9BQN1 747 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 EPC1Q9H2F5 836 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 SLC39A2Q9NP94 309 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 TRPM5Q9NZQ8 1165 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 PRUNE2Q8WUY3 3088 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 SMC2O95347 1197 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 OLFM2O95897 454 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms