RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 GPR88Q9GZN0 384 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 NIF3L1Q9GZT8 377 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 DNAJC25Q9H1X3 360 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 CRTAC1Q9NQ79 661 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 RWDD2AQ9UIY3 292 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 DOCK6Q96HP0 2047 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 MYO10Q9HD67 2058 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 TMEM221A6NGB7 291 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 PRR33A8MZF0 331 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 M0R296 226 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 CCDC192P0DO97 292 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 GJA1P17302 382 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 BDNFP23560 247 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 CCR2P41597 374 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 MAGEA11P43364 429 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 CCDC142Q17RM4 750 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 SDHAF4Q5VUM1 108 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 FAM171BQ6P995 826 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 FOXR2Q6PJQ5 311 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 PARM1Q6UWI2 310 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 SLC44A3Q8N4M1 653 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 SHKBP1Q8TBC3 707 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 PBXIP1Q96AQ6 731 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 PCED1BQ96HM7 432 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 PKMYT1Q99640 499 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 DUSP9Q99956 384 aaKnown RBP14.26□□□□□ -0.13
CAPN1-227ENST00000533909 KXD1Q9BQD3 176 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 SRRTQ9BXP5 876 aaKnown RBP14.26□□□□□ -0.13
CAPN1-227ENST00000533909 ELOVL4Q9GZR5 314 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 MFSD1Q9H3U5 465 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 DPEP3Q9H4B8 488 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 CYP3A43Q9HB55 503 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 RAB20Q9NX57 234 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 EHD2Q9NZN4 543 aa14.26□□□□□ -0.13
CAPN1-227ENST00000533909 UXTQ9UBK9 157 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-227ENST00000533909 ANHXE9PGG2 379 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 TRIM66O15016 1216 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 MBD3O95983 291 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 CD58P19256 250 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 ASPAP45381 313 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 GPR15P49685 360 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 NDST1P52848 882 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 ACOT1Q86TX2 421 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 UNC93AQ86WB7 457 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 TMC8Q8IU68 726 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 SUGP1Q8IWZ8 645 aaKnown RBP14.25□□□□□ -0.13
CAPN1-227ENST00000533909 TTC39CQ8N584 583 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 MRPS31Q92665 395 aaKnown RBP14.25□□□□□ -0.13
CAPN1-227ENST00000533909 FGF14Q92915 247 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 SMARCD2Q92925 531 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 LRFN3Q9BTN0 628 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 SMOC2Q9H3U7 446 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 ZFP14Q9HCL3 533 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 ZNF334Q9HCZ1 680 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-227ENST00000533909 DUSP12Q9UNI6 340 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 DOCK8Q8NF50 2099 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 TRIOO75962 3097 aa14.25□□□□□ -0.13
CAPN1-227ENST00000533909 SLC38A8A6NNN8 435 aa14.24□□□□□ -0.13
CAPN1-227ENST00000533909 DPYSL4O14531 572 aa14.24□□□□□ -0.13
CAPN1-227ENST00000533909 CFHP08603 1231 aa14.24□□□□□ -0.13
CAPN1-227ENST00000533909 SRFP11831 508 aa14.24□□□□□ -0.13
CAPN1-227ENST00000533909 ORC1Q13415 861 aa14.24□□□□□ -0.13
CAPN1-227ENST00000533909 CBWD6Q4V339 395 aa14.24□□□□□ -0.13
CAPN1-227ENST00000533909 CBWD3Q5JTY5 395 aa14.24□□□□□ -0.13
CAPN1-227ENST00000533909 FAM78AQ5JUQ0 283 aa14.24□□□□□ -0.13
CAPN1-227ENST00000533909 CBWD5Q5RIA9 395 aa14.24□□□□□ -0.13
CAPN1-227ENST00000533909 GPR158Q5T848 1215 aa14.24□□□□□ -0.13
CAPN1-227ENST00000533909 ZSCAN18Q8TBC5 510 aaPredicted RBP14.24□□□□□ -0.13
CAPN1-227ENST00000533909 SLC35C1Q96A29 364 aa14.24□□□□□ -0.13
CAPN1-227ENST00000533909 NT5C1AQ9BXI3 368 aa14.24□□□□□ -0.13
CAPN1-227ENST00000533909 BCO2Q9BYV7 579 aa14.24□□□□□ -0.13
CAPN1-227ENST00000533909 SDCBP2Q9H190 292 aa14.24□□□□□ -0.13
CAPN1-227ENST00000533909 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.24□□□□□ -0.13
CAPN1-227ENST00000533909 ZDBF2Q9HCK1 2354 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 F8VP50 259 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 STK25O00506 426 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 NARSO43776 548 aaKnown RBP14.23□□□□□ -0.13
CAPN1-227ENST00000533909 ECI2O75521 394 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 FMO5P49326 533 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 NLRP12P59046 1061 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 YWHAEP62258 255 aaKnown RBP14.23□□□□□ -0.13
CAPN1-227ENST00000533909 LRMPQ12912 555 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 GAREM2Q75VX8 874 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 YAF2Q8IY57 180 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 STKLD1Q8NE28 680 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 SEMA4DQ92854 862 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 E2F7Q96AV8 911 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 ELSPBP1Q96BH3 223 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 FAXDC2Q96IV6 333 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 SPATA17Q96L03 361 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 CEP295NLQ96MC4 621 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 ASB16Q96NS5 453 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 LRRC3Q9BY71 257 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 ZNF518BQ9C0D4 1074 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 APOBEC3GQ9HC16 384 aaKnown RBP14.23□□□□□ -0.13
CAPN1-227ENST00000533909 C11orf16Q9NQ32 467 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 ZMYM5Q9UJ78 669 aa14.23□□□□□ -0.13
CAPN1-227ENST00000533909 NOTCH4Q99466 2003 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 TECTAO75443 2155 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 CLDN5O00501 218 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms