RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 UVSSAQ2YD98 709 aa13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 MDH1BQ5I0G3 518 aa13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 C12orf29Q8N999 325 aa13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 CMASQ8NFW8 434 aaPredicted RBP13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 SPPL2BQ8TCT7 592 aa13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 SHC3Q92529 594 aa13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 TMEM176AQ96HP8 235 aa13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 TNIP3Q96KP6 325 aa13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 FAM81BQ96LP2 452 aa13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 UBE2ZQ9H832 354 aaPredicted RBP13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 ABCB6Q9NP58 842 aa13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 PRDM6Q9NQX0 595 aa13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 SLC27A5Q9Y2P5 690 aa13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 FHOD1Q9Y613 1164 aa13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 PTPRDP23468 1912 aa13.54□□□□□ -0.24
RPUSD4-208ENST00000533628 A0A1W2PQC6 194 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 RFPL2O75678 378 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 C8AP07357 584 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 MFAP3P55082 362 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 UBASH3AP57075 661 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 MAPRE1Q15691 268 aaKnown RBP13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 CFAP221Q4G0U5 840 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 FILIP1LQ4L180 1135 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 ZNF394Q53GI3 561 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 C12orf76Q8N812 135 aaPredicted RBP13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 SLC7A14Q8TBB6 771 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 ZNF707Q96C28 371 aaPredicted RBP13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 FUBP3Q96I24 572 aaKnown RBP eCLIP13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 RHOBTB2Q9BYZ6 727 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 CYP4F11Q9HBI6 524 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 IFNKQ9P0W0 207 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 CEP72Q9P209 647 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 PCDHB5Q9Y5E4 795 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 PCDHB4Q9Y5E5 795 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 INSL5Q9Y5Q6 135 aa13.53□□□□□ -0.24
RPUSD4-208ENST00000533628 HOXB8P17481 243 aaPredicted RBP13.52□□□□□ -0.24
RPUSD4-208ENST00000533628 HOXA9P31269 272 aa13.52□□□□□ -0.24
RPUSD4-208ENST00000533628 TMEM270Q6UE05 265 aa13.52□□□□□ -0.24
RPUSD4-208ENST00000533628 CCDC149Q6ZUS6 474 aa13.52□□□□□ -0.24
RPUSD4-208ENST00000533628 FUKQ8N0W3 1084 aa13.52□□□□□ -0.24
RPUSD4-208ENST00000533628 HLA-CQ95604 372 aa13.52□□□□□ -0.24
RPUSD4-208ENST00000533628 TMEM30AQ9NV96 361 aa13.52□□□□□ -0.24
RPUSD4-208ENST00000533628 ZDHHC7Q9NXF8 308 aa13.52□□□□□ -0.24
RPUSD4-208ENST00000533628 ABI2Q9NYB9 513 aaPredicted RBP13.52□□□□□ -0.24
RPUSD4-208ENST00000533628 DPP7Q9UHL4 492 aa13.52□□□□□ -0.24
RPUSD4-208ENST00000533628 FOXN3O00409 490 aaPredicted RBP13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 CLDN5O00501 218 aa13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 POU2F2P09086 479 aa13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 RFX1P22670 979 aa13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 CYP2F1P24903 491 aa13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 MAGEA11P43364 429 aa13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 ARHGAP44Q17R89 818 aa13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 C4orf50Q6ZRC1 276 aa13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 SPATA2LQ8IUW3 424 aaPredicted RBP13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 RBBP8NLQ8NC74 664 aaPredicted RBP13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 HNRNPABQ99729 332 aaKnown RBP13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 ZSWIM1Q9BR11 485 aa13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 ZNF518BQ9C0D4 1074 aa13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 XPO4Q9C0E2 1151 aaKnown RBP13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 SFXN1Q9H9B4 322 aa13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 FAM207AQ9NSI2 230 aaPredicted RBP13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 COG5Q9UP83 839 aa13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 YIPF1Q9Y548 306 aa13.52□□□□□ -0.25
RPUSD4-208ENST00000533628 PRRG1O14668 218 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 SOAT2O75908 522 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 PAEPP09466 180 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 HNRNPA1P09651 372 aaKnown RBP eCLIP13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 SRGAP2BP0DMP2 458 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 CCDC130P13994 396 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 ATF6P18850 670 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 ELF1P32519 619 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 CACNA2D1P54289 1103 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 JAM2P57087 298 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 DRAP1Q14919 205 aaPredicted RBP13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 SKIV2LQ15477 1246 aaKnown RBP13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 LIN9Q5TKA1 542 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 ARHGAP17Q68EM7 881 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 SARM1Q6SZW1 724 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 FAM71AQ8IYT1 594 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 TFAP2BQ92481 460 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 STK33Q9BYT3 514 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 PRKD2Q9BZL6 878 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 FAM49BQ9NUQ9 324 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 DAAM1Q9Y4D1 1078 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 CCDC195A0A1B0GUA6 201 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 H3BQ06 376 aaPredicted RBP13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 CALCAP01258 141 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 PNMA6AP0CW24 399 aaPredicted RBP13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 KCNA5P22460 613 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 BDNFP23560 247 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 TUFMP49411 452 aaKnown RBP13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 GPR15P49685 360 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 CYP27A1Q02318 531 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 PPM1LQ5SGD2 360 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 RARS2Q5T160 578 aaKnown RBP13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 PPP1R26Q5T8A7 1209 aaPredicted RBP13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 ZNF771Q7L3S4 317 aaPredicted RBP13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 GPR149Q86SP6 731 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 FAM35AQ86V20 835 aa13.51□□□□□ -0.25
RPUSD4-208ENST00000533628 SMRP1Q8NCR6 262 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms