RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 AFMP43652 599 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 CXCL12P48061 93 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 FOXK2Q01167 660 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 DGKKQ5KSL6 1271 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 RESP18Q5W5W9 173 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 SCARA3Q6AZY7 606 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 FAM171BQ6P995 826 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 TSSK4Q6SA08 328 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 TRAPPC11Q7Z392 1133 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 MON1AQ86VX9 555 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 NELFCDQ8IXH7 590 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 SUMF1Q8NBK3 374 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 SCFD1Q8WVM8 642 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 NELL1Q92832 810 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 SECISBP2LQ93073 1101 aaKnown RBP13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 TRMT2BQ96GJ1 504 aaKnown RBP13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 ZFYVE19Q96K21 471 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 FAM84AQ96KN4 292 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 MYRFLQ96LU7 910 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 MMS19Q96T76 1030 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 BLZF1Q9H2G9 400 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 TDP1Q9NUW8 608 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 GTSE1Q9NYZ3 720 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 RCOR1Q9UKL0 485 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 CDH9Q9ULB4 789 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 TICRRQ7Z2Z1 1910 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 CLIC2O15247 247 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 FAM163BP0C2L3 166 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 CTHP32929 405 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 MAGEA11P43364 429 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 ID4P47928 161 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 SOX9P48436 509 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 GPR15P49685 360 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 CYP2J2P51589 502 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 AMPD2Q01433 879 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 DNM1Q05193 864 aaKnown RBP13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 EHHADHQ08426 723 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 PSMD6Q15008 389 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 KNOP1Q1ED39 458 aaKnown RBP13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 ITPRIPL2Q3MIP1 535 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 TXNDC8Q6A555 127 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 CC2D1AQ6P1N0 951 aaPredicted RBP13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 LIMS2Q7Z4I7 341 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 TMEM150AQ86TG1 271 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 OSTM1Q86WC4 334 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 SCN4BQ8IWT1 228 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 SYNPOQ8N3V7 929 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 SPEM1Q8N4L4 309 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 FSIP1Q8NA03 581 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 TTC8Q8TAM2 541 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 GOLGA5Q8TBA6 731 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 CCDC127Q96BQ5 260 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 PKMYT1Q99640 499 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 SMG9Q9H0W8 520 aaKnown RBP13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 KIF9Q9HAQ2 790 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 SLC39A2Q9NP94 309 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 GKN1Q9NS71 199 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 MAGEC2Q9UBF1 373 aaPredicted RBP13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 PTPRJQ12913 1337 aa13.29□□□□□ -0.28
CAPRIN1-213ENST00000533562 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 LILRB5O75023 590 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 NOL4O94818 638 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 CST3P01034 146 aaPredicted RBP13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 PDGFRBP09619 1106 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 SLFN14P0C7P3 912 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 WARSP23381 471 aaKnown RBP13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 LMO2P25791 158 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 GNL1P36915 607 aaPredicted RBP13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 CYP24A1Q07973 514 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 TRPC3Q13507 836 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 CUL4BQ13620 913 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 ZNF268Q14587 947 aaPredicted RBP13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 BMT2Q1RMZ1 405 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 SDHAF4Q5VUM1 108 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 VSTM1Q6UX27 236 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 C12orf56Q8IXR9 622 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 KIAA2013Q8IYS2 634 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 SPRYD3Q8NCJ5 442 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 KBTBD7Q8WVZ9 684 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 USP13Q92995 863 aaPredicted RBP13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 CEP295NLQ96MC4 621 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 FAM83CQ9BQN1 747 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 SYT15Q9BQS2 421 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 EPC1Q9H2F5 836 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 SNX25Q9H3E2 840 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 EHD2Q9NZN4 543 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 NCDNQ9UBB6 729 aa13.28□□□□□ -0.28
CAPRIN1-213ENST00000533562 PATJQ8NI35 1801 aa13.27□□□□□ -0.28
CAPRIN1-213ENST00000533562 NUP210Q8TEM1 1887 aaPredicted RBP13.27□□□□□ -0.28
CAPRIN1-213ENST00000533562 EXOC3O60645 756 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 ATP2C2O75185 946 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 TACC1O75410 805 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 CASP1P29466 404 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 GRIK1P39086 918 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 TNNC1P63316 161 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 TNK2Q07912 1038 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 PSMD2Q13200 908 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 RUNX3Q13761 415 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 PKP1Q13835 747 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 PON2Q15165 354 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms