RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TRIM59Q8IWR1 403 aa21.81■■□□□ 1.08
CCS-208ENST00000533244 UBALD2Q8IYN6 164 aa21.81■■□□□ 1.08
CCS-208ENST00000533244 SHKBP1Q8TBC3 707 aa21.81■■□□□ 1.08
CCS-208ENST00000533244 CYP3A43Q9HB55 503 aa21.81■■□□□ 1.08
CCS-208ENST00000533244 IL21Q9HBE4 155 aa21.81■■□□□ 1.08
CCS-208ENST00000533244 MAGEC2Q9UBF1 373 aaPredicted RBP21.81■■□□□ 1.08
CCS-208ENST00000533244 CLSTN1O94985 981 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 HMGA1P17096 107 aaKnown RBP21.8■■□□□ 1.08
CCS-208ENST00000533244 TDGQ13569 410 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 DPCR1Q3MIW9 517 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 VSTM1Q6UX27 236 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 GAREM2Q75VX8 874 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 UNC93AQ86WB7 457 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 GIPC2Q8TF65 315 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 RSAD2Q8WXG1 361 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 FGF14Q92915 247 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 SRRTQ9BXP5 876 aaKnown RBP21.8■■□□□ 1.08
CCS-208ENST00000533244 SMOC2Q9H3U7 446 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 FGF19O95750 216 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 FMO5P49326 533 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 NLRP12P59046 1061 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 SIGLEC14Q08ET2 396 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 DDR2Q16832 855 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 PARM1Q6UWI2 310 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 TRIM67Q6ZTA4 783 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 MTSS1LQ765P7 747 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 CCDC150Q8NCX0 1101 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 FAM200AQ8TCP9 573 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 MCRS1Q96EZ8 462 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 TNIP3Q96KP6 325 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 CEP295NLQ96MC4 621 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.8■■□□□ 1.081e-8■■■■■ 67.2
CCS-208ENST00000533244 HMGXB4Q9UGU5 601 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 DUSP12Q9UNI6 340 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 NUMBLQ9Y6R0 609 aa21.8■■□□□ 1.08
CCS-208ENST00000533244 NOL4O94818 638 aa21.79■■□□□ 1.08
CCS-208ENST00000533244 FGFR1OPO95684 399 aaKnown RBP21.79■■□□□ 1.08
CCS-208ENST00000533244 MBD3O95983 291 aa21.79■■□□□ 1.08
CCS-208ENST00000533244 CSH1P0DML2 217 aa21.79■■□□□ 1.08
CCS-208ENST00000533244 CSH2P0DML3 217 aa21.79■■□□□ 1.08
CCS-208ENST00000533244 GJA1P17302 382 aa21.79■■□□□ 1.08
CCS-208ENST00000533244 NDST1P52848 882 aa21.79■■□□□ 1.08
CCS-208ENST00000533244 CYP27A1Q02318 531 aa21.79■■□□□ 1.08
CCS-208ENST00000533244 CRYBG2Q8N1P7 616 aa21.79■■□□□ 1.08
CCS-208ENST00000533244 SLC44A3Q8N4M1 653 aa21.79■■□□□ 1.08
CCS-208ENST00000533244 GPR152Q8TDT2 470 aa21.79■■□□□ 1.08
CCS-208ENST00000533244 B3GNT5Q9BYG0 378 aa21.79■■□□□ 1.08
CCS-208ENST00000533244 A0A1W2PRU2 124 aa21.78■■□□□ 1.08
CCS-208ENST00000533244 BDNFP23560 247 aa21.78■■□□□ 1.08
CCS-208ENST00000533244 FCARP24071 287 aa21.78■■□□□ 1.08
CCS-208ENST00000533244 GABRR2P28476 465 aa21.78■■□□□ 1.08
CCS-208ENST00000533244 TEAD2Q15562 447 aa21.78■■□□□ 1.08
CCS-208ENST00000533244 SDHAF4Q5VUM1 108 aa21.78■■□□□ 1.08
CCS-208ENST00000533244 ASIC4Q96FT7 647 aa21.78■■□□□ 1.08
CCS-208ENST00000533244 TRMT2BQ96GJ1 504 aaKnown RBP21.78■■□□□ 1.08
CCS-208ENST00000533244 SPATA17Q96L03 361 aa21.78■■□□□ 1.08
CCS-208ENST00000533244 MYRFLQ96LU7 910 aa21.78■■□□□ 1.08
CCS-208ENST00000533244 ELOVL4Q9GZR5 314 aa21.78■■□□□ 1.08
CCS-208ENST00000533244 FAM124BQ9H5Z6 455 aaPredicted RBP21.78■■□□□ 1.08
CCS-208ENST00000533244 TMEM30AQ9NV96 361 aa21.78■■□□□ 1.08
CCS-208ENST00000533244 GREB1Q4ZG55 1949 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 FAM86C2PA6NEL3 165 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 P4HA2O15460 535 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 CILPO75339 1184 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 ERCC5P28715 1186 aaPredicted RBP21.77■■□□□ 1.08
CCS-208ENST00000533244 TMEM31Q5JXX7 168 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 PAQR9Q6ZVX9 377 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 TMEM150AQ86TG1 271 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 IRF2BP1Q8IU81 584 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 STKLD1Q8NE28 680 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 WHAMMQ8TF30 809 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 C8orf48Q96LL4 319 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 ZSWIM3Q96MP5 696 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 ASB16Q96NS5 453 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 TWNKQ96RR1 684 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 RPP25Q9BUL9 199 aaKnown RBP21.77■■□□□ 1.08
CCS-208ENST00000533244 ZNF518BQ9C0D4 1074 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 GPR88Q9GZN0 384 aa21.77■■□□□ 1.08
CCS-208ENST00000533244 OBSL1O75147 1896 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 DENND4CQ5VZ89 1909 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 SLC38A8A6NNN8 435 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 ECI2O75521 394 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 F11P03951 625 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 CCDC192P0DO97 292 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 CDC25CP30307 473 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 CACNA2D1P54289 1103 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 CT47A1Q5JQC4 288 aaPredicted RBP21.76■■□□□ 1.07
CCS-208ENST00000533244 WDR44Q5JSH3 913 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 FAM78AQ5JUQ0 283 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 ACOT1Q86TX2 421 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 SCN4BQ8IWT1 228 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 ST13P5Q8NFI4 369 aaPredicted RBP21.76■■□□□ 1.07
CCS-208ENST00000533244 TATDN2Q93075 761 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 TRPV4Q9HBA0 871 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 DACH1Q9UI36 760 aa21.76■■□□□ 1.07
CCS-208ENST00000533244 TMEM221A6NGB7 291 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 PRR33A8MZF0 331 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 M0R296 226 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 CLDN5O00501 218 aa21.75■■□□□ 1.07
CCS-208ENST00000533244 TRIM66O15016 1216 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms