RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 PRUNE1Q86TP1 453 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 IPMKQ8NFU5 416 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 ELMO2Q96JJ3 720 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 PDCD2LQ9BRP1 358 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 MROH1Q8NDA8 1641 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 ANXA9O76027 345 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 IL10P22301 178 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 ALDH5A1P51649 535 aaPredicted RBP15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 MAP3K10Q02779 954 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 RAD9BQ6WBX8 426 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 LINC00523Q86TU6 105 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 YIPF2Q9BWQ6 316 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 NOP53Q9NZM5 478 aaKnown RBP15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 PKD2L2Q9NZM6 624 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 H0Y626 953 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 PON1P27169 355 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 POLD3Q15054 466 aaPredicted RBP15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 EFL1Q7Z2Z2 1120 aaKnown RBP15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 ZCWPW1Q9H0M4 648 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 TRABDQ9H4I3 376 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 STN1Q9H668 368 aaKnown RBP15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 RIOX1Q9H6W3 641 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 M0QYT0 321 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 ZSCAN9O15535 394 aaPredicted RBP15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 ADCYAP1R1P41586 468 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 PRKCQQ04759 706 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 SPDYAQ5MJ70 313 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 RABGAP1LQ5R372 815 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 SPATA18Q8TC71 538 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 CINPQ9BW66 212 aaPredicted RBP15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 THAP2Q9H0W7 228 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 IPPQ9Y573 584 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 KRT4P19013 534 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 CCZ1BP86790 482 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 CCZ1P86791 482 aaPredicted RBP15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 ADGRF2Q8IZF7 708 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 COG1Q8WTW3 980 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 KIAA1683Q9H0B3 1180 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 GIMAP4Q9NUV9 329 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 MRPL42Q9Y6G3 142 aaKnown RBP15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 KIF1AQ12756 1690 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 ZBTB39O15060 712 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 HOXC6P09630 235 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 CXCL8P10145 99 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 INSRRP14616 1297 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 AMPD2Q01433 879 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 TTLL9Q3SXZ7 439 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 DNAAF5Q86Y56 855 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 ARL8AQ96BM9 186 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 FAM198AQ9UFP1 575 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 TRIM17Q9Y577 477 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 FAM86B1E9PN63 330 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 H3BRB1 525 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 FAM86B2P0C5J1 330 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 ACO1P21399 889 aaKnown RBP15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 HSPA9P38646 679 aaKnown RBP15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 FEZF2Q8TBJ5 459 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 TUT1Q9H6E5 874 aaKnown RBP15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 MANSC4A6NHS7 340 aaPredicted RBP15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 VIL1P09327 827 aaKnown RBP15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 EPHB2P29323 1055 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 MIB1Q86YT6 1006 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 STX19Q8N4C7 294 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 TC2NQ8N9U0 490 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 DACH2Q96NX9 599 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 SEMA6BQ9H3T3 888 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 CRLS1Q9UJA2 301 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 A0A1W2PQJ5 194 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 STX7O15400 261 aaKnown RBP15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 AGTP01019 485 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 RBP3P10745 1247 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 AP2B1P63010 937 aa15.39■□□□□ 0.05
PCDHA9-202ENST00000532602 LONRF1Q17RB8 773 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 FAM32AQ9Y421 112 aaKnown RBP15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 ENDOD1O94919 500 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 CENPCQ03188 943 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 ERLEC1Q96DZ1 483 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 RPRD1AQ96P16 312 aaPredicted RBP15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 CELF4Q9BZC1 486 aaKnown RBP15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 NEU2Q9Y3R4 380 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 HEATR9A2RTY3 570 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 LRRIQ3A6PVS8 624 aaPredicted RBP15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 RNASEH1O60930 286 aaKnown RBP15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 CSE1LP55060 971 aaKnown RBP15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 ERVK-9P63128 1117 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 ERVK-24P63145 666 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 ZNF200P98182 395 aaPredicted RBP15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 OCA2Q04671 838 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 MDH1BQ5I0G3 518 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 C6orf10Q5SRN2 563 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 METTL7BQ6UX53 244 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 ANO5Q75V66 913 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 SYN2Q92777 582 aaPredicted RBP15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 C20orf96Q9NUD7 363 aaPredicted RBP15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 DDIT4Q9NX09 232 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 CD274Q9NZQ7 290 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 TRPM5Q9NZQ8 1165 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms