RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 ZMYM5Q9UJ78 669 aa16.93■□□□□ 0.3
LDLRAD3-205ENST00000532490 CDH9Q9ULB4 789 aa16.93■□□□□ 0.3
LDLRAD3-205ENST00000532490 MRPS17Q9Y2R5 130 aaKnown RBP16.93■□□□□ 0.3
LDLRAD3-205ENST00000532490 R3HCC1Q9Y3T6 440 aaKnown RBP16.93■□□□□ 0.3
LDLRAD3-205ENST00000532490 PIAS3Q9Y6X2 628 aa16.93■□□□□ 0.3
LDLRAD3-205ENST00000532490 CFAP54Q96N23 3096 aa16.93■□□□□ 0.3
LDLRAD3-205ENST00000532490 PTPRDP23468 1912 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 GREB1Q4ZG55 1949 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 A0A1W2PQ27 194 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 A0A1W2PQ64 194 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 A0A1W2PQD8 194 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 SOBPA7XYQ1 873 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 PDXKO00764 312 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 TACC1O75410 805 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 TADA3O75528 432 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 RPN1P04843 607 aaKnown RBP16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 FAM163BP0C2L3 166 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 PRR29P0C7W0 189 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 MAGEA11P43364 429 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 CASP4P49662 377 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 RPL10AP62906 217 aaKnown RBP16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 TAF12Q16514 161 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 SPATA2LQ8IUW3 424 aaPredicted RBP16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 CMTM8Q8IZV2 173 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 NKD2Q969F2 451 aaPredicted RBP16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 TRMT2BQ96GJ1 504 aaKnown RBP16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 SYT15Q9BQS2 421 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 MRPL45Q9BRJ2 306 aaKnown RBP16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 GOLPH3LQ9H4A5 285 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 ATP6V1DQ9Y5K8 247 aa16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 KIF26AQ9ULI4 1882 aaPredicted RBP16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 PTPRZ1P23471 2315 aaPredicted RBP16.92■□□□□ 0.3
LDLRAD3-205ENST00000532490 FAM186AA6NE01 2351 aa16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 SLC38A8A6NNN8 435 aa16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 LRRIQ3A6PVS8 624 aaPredicted RBP16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 NCAM2O15394 837 aa16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 C4BPAP04003 597 aaKnown RBP16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 PDGFRBP09619 1106 aa16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 DDX6P26196 483 aaKnown RBP eCLIP16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 MYL6P60660 151 aa16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 PSMC1P62191 440 aaKnown RBP16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 DPYDQ12882 1025 aa16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 WDR72Q3MJ13 1102 aa16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 ARHGAP29Q52LW3 1261 aa16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 YAF2Q8IY57 180 aa16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 FAM3CQ92520 227 aa16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 GCNAQ96QF7 691 aa16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 MMS19Q96T76 1030 aa16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 SMG9Q9H0W8 520 aaKnown RBP16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 VRTNQ9H8Y1 702 aa16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 SPATA6Q9NWH7 488 aaPredicted RBP16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 FBXO4Q9UKT5 387 aa16.91■□□□□ 0.3
LDLRAD3-205ENST00000532490 DPYSL4O14531 572 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 RHOBTB3O94955 611 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 ATICP31939 592 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 GNL1P36915 607 aaPredicted RBP16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 ZNF528Q3MIS6 628 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 TDRD10Q5VZ19 366 aaKnown RBP16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 TXNDC8Q6A555 127 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 KRBA2Q6ZNG9 492 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 C4orf50Q6ZRC1 276 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 MON1AQ86VX9 555 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 CELF5Q8N6W0 485 aaKnown RBP16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 MAB21L3Q8N8X9 362 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 FSIP1Q8NA03 581 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 MYCBPAPQ8TBZ2 947 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 BPIFB1Q8TDL5 484 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 USP13Q92995 863 aaPredicted RBP16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 MYLPFQ96A32 169 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 ZFYVE19Q96K21 471 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 MAGEC2Q9UBF1 373 aaPredicted RBP16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 NDRG2Q9UN36 371 aaKnown RBP16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 MAGED2Q9UNF1 606 aaPredicted RBP16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 CCL26Q9Y258 94 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 R4GN57 208 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 ANAPC1Q9H1A4 1944 aa16.9■□□□□ 0.3
LDLRAD3-205ENST00000532490 VNN1O95497 513 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 NR3C1P04150 777 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 CHRNB1P11230 501 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 CCNE1P24864 410 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 SOX9P48436 509 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 AP3M2P53677 418 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 DLG4P78352 724 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 MTAPQ13126 283 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 TRPC3Q13507 836 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 MAPRE1Q15691 268 aaKnown RBP16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 WDR44Q5JSH3 913 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 VSTM1Q6UX27 236 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 MAMSTRQ6ZN01 415 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 SCN4BQ8IWT1 228 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 CSGALNACT1Q8TDX6 532 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 NELL1Q92832 810 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 MSANTD3Q96H12 275 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 PCED1BQ96HM7 432 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 SPATA17Q96L03 361 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 CHRDQ9H2X0 955 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 SEMA4AQ9H3S1 761 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 C8orf33Q9H7E9 229 aaPredicted RBP16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 GDPD2Q9HCC8 539 aa16.89■□□□□ 0.29
LDLRAD3-205ENST00000532490 GTSE1Q9NYZ3 720 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms