RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 LRRC63Q05C16 580 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 DDR2Q16832 855 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 ANKRD40Q6AI12 368 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 FLCNQ8NFG4 579 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 MYLPFQ96A32 169 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 E2F7Q96AV8 911 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 DHTKD1Q96HY7 919 aaPredicted RBP24.53■■□□□ 1.52
CAPN1-222ENST00000532285 SMYD3Q9H7B4 428 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 IL21Q9HBE4 155 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 PSMA7O14818 248 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 ASS1P00966 412 aaKnown RBP24.52■■□□□ 1.52
CAPN1-222ENST00000532285 HMGA1P17096 107 aaKnown RBP24.52■■□□□ 1.52
CAPN1-222ENST00000532285 NPR3P17342 541 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 PTPN1P18031 435 aaKnown RBP24.52■■□□□ 1.52
CAPN1-222ENST00000532285 GTF2H1P32780 548 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 GCLMP48507 274 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 CDH8P55286 799 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 CYP27A1Q02318 531 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 PPP3CAQ08209 521 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 MDH1BQ5I0G3 518 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 GPR158Q5T848 1215 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 ISM2Q6H9L7 571 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 VSTM1Q6UX27 236 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 EEF2KMTQ96G04 330 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 PCED1BQ96HM7 432 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 PRRX2Q99811 253 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 IMPG2Q9BZV3 1241 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 UXTQ9UBK9 157 aaPredicted RBP24.52■■□□□ 1.52
CAPN1-222ENST00000532285 NME7Q9Y5B8 376 aa24.52■■□□□ 1.52
CAPN1-222ENST00000532285 SLC16A3O15427 465 aaKnown RBP24.51■■□□□ 1.51
CAPN1-222ENST00000532285 STX10O60499 249 aa24.51■■□□□ 1.51
CAPN1-222ENST00000532285 BDNFP23560 247 aa24.51■■□□□ 1.51
CAPN1-222ENST00000532285 CCNE1P24864 410 aa24.51■■□□□ 1.51
CAPN1-222ENST00000532285 STXBP5Q5T5C0 1151 aa24.51■■□□□ 1.51
CAPN1-222ENST00000532285 SDHAF4Q5VUM1 108 aa24.51■■□□□ 1.51
CAPN1-222ENST00000532285 SCARA5Q6ZMJ2 495 aa24.51■■□□□ 1.51
CAPN1-222ENST00000532285 SCN4BQ8IWT1 228 aa24.51■■□□□ 1.51
CAPN1-222ENST00000532285 ZC3H3Q8IXZ2 948 aaKnown RBP24.51■■□□□ 1.51
CAPN1-222ENST00000532285 CEP295NLQ96MC4 621 aa24.51■■□□□ 1.51
CAPN1-222ENST00000532285 TASP1Q9H6P5 420 aa24.51■■□□□ 1.51
CAPN1-222ENST00000532285 TMEM8AQ9HCN3 771 aa24.51■■□□□ 1.51
CAPN1-222ENST00000532285 ARHGEF3Q9NR81 526 aa24.51■■□□□ 1.51
CAPN1-222ENST00000532285 ZMYM5Q9UJ78 669 aa24.51■■□□□ 1.51
CAPN1-222ENST00000532285 MAGED2Q9UNF1 606 aaPredicted RBP24.51■■□□□ 1.51
CAPN1-222ENST00000532285 STK25O00506 426 aa24.5■■□□□ 1.51
CAPN1-222ENST00000532285 NOL4O94818 638 aa24.5■■□□□ 1.51
CAPN1-222ENST00000532285 PSMC3P17980 439 aa24.5■■□□□ 1.51
CAPN1-222ENST00000532285 VIPR2P41587 438 aa24.5■■□□□ 1.51
CAPN1-222ENST00000532285 NUBP1P53384 320 aa24.5■■□□□ 1.51
CAPN1-222ENST00000532285 PMS1P54277 932 aaKnown RBP24.5■■□□□ 1.51
CAPN1-222ENST00000532285 NLRP12P59046 1061 aa24.5■■□□□ 1.51
CAPN1-222ENST00000532285 IER5LQ5T953 404 aa24.5■■□□□ 1.51
CAPN1-222ENST00000532285 VITQ6UXI7 678 aa24.5■■□□□ 1.51
CAPN1-222ENST00000532285 B3GALNT2Q8NCR0 500 aa24.5■■□□□ 1.51
CAPN1-222ENST00000532285 ELMO3Q96BJ8 720 aa24.5■■□□□ 1.51
CAPN1-222ENST00000532285 TRMT2BQ96GJ1 504 aaKnown RBP24.5■■□□□ 1.51
CAPN1-222ENST00000532285 SHDQ96IW2 340 aa24.5■■□□□ 1.51
CAPN1-222ENST00000532285 TRMT61BQ9BVS5 477 aaKnown RBP24.5■■□□□ 1.51
CAPN1-222ENST00000532285 DPEP3Q9H4B8 488 aa24.5■■□□□ 1.51
CAPN1-222ENST00000532285 MMRN2Q9H8L6 949 aa24.5■■□□□ 1.51
CAPN1-222ENST00000532285 ANAPC1Q9H1A4 1944 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 MYH10P35580 1976 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 TRIM49BA6NDI0 452 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 SLC38A8A6NNN8 435 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 F11P03951 625 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 RFX1P22670 979 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 WEE1P30291 646 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 GRIK1P39086 918 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 RAP1GAPP47736 663 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 CYP4F8P98187 520 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 MORC3Q14149 939 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 SLC44A4Q53GD3 710 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 CWF19L1Q69YN2 538 aaKnown RBP24.49■■□□□ 1.51
CAPN1-222ENST00000532285 KRT39Q6A163 491 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 PHLDB3Q6NSJ2 640 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 ARID3BQ8IVW6 561 aaPredicted RBP24.49■■□□□ 1.51
CAPN1-222ENST00000532285 MFSD6LQ8IWD5 586 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 TMEM105Q8N8V8 129 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 CCDC150Q8NCX0 1101 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 TAS1R2Q8TE23 839 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 DEPDC1BQ8WUY9 529 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 TNIP3Q96KP6 325 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 SPATA17Q96L03 361 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 MYRFLQ96LU7 910 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 SDCBP2Q9H190 292 aa24.49■■□□□ 1.51
CAPN1-222ENST00000532285 TRIM66O15016 1216 aa24.48■■□□□ 1.51
CAPN1-222ENST00000532285 CD44P16070 742 aaKnown RBP24.48■■□□□ 1.51
CAPN1-222ENST00000532285 AOC1P19801 751 aa24.48■■□□□ 1.51
CAPN1-222ENST00000532285 DDX6P26196 483 aaKnown RBP eCLIP24.48■■□□□ 1.51
CAPN1-222ENST00000532285 ANXA13P27216 316 aa24.48■■□□□ 1.51
CAPN1-222ENST00000532285 GRM2Q14416 872 aa24.48■■□□□ 1.51
CAPN1-222ENST00000532285 SPOPLQ6IQ16 392 aa24.48■■□□□ 1.51
CAPN1-222ENST00000532285 TICRRQ7Z2Z1 1910 aa24.48■■□□□ 1.51
CAPN1-222ENST00000532285 TMEM150AQ86TG1 271 aa24.48■■□□□ 1.51
CAPN1-222ENST00000532285 STKLD1Q8NE28 680 aa24.48■■□□□ 1.51
CAPN1-222ENST00000532285 BRD9Q9H8M2 597 aa24.48■■□□□ 1.51
CAPN1-222ENST00000532285 TBC1D17Q9HA65 648 aa24.48■■□□□ 1.51
CAPN1-222ENST00000532285 MUC6Q6W4X9 2439 aa24.47■■□□□ 1.51
CAPN1-222ENST00000532285 MIA3Q5JRA6 1907 aa24.47■■□□□ 1.51
CAPN1-222ENST00000532285 SOBPA7XYQ1 873 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms