RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 KATNAL2Q8IYT4 538 aa16.04■□□□□ 0.16
SRPRA-206ENST00000532259 SMG8Q8ND04 991 aaKnown RBP16.04■□□□□ 0.16
SRPRA-206ENST00000532259 OR6B3Q8NGW1 331 aa16.04■□□□□ 0.16
SRPRA-206ENST00000532259 DCLK3Q9C098 648 aa16.04■□□□□ 0.16
SRPRA-206ENST00000532259 LRRC19Q9H756 370 aa16.04■□□□□ 0.16
SRPRA-206ENST00000532259 CYP3A43Q9HB55 503 aa16.04■□□□□ 0.16
SRPRA-206ENST00000532259 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.04■□□□□ 0.16
SRPRA-206ENST00000532259 SAE1Q9UBE0 346 aaPredicted RBP16.04■□□□□ 0.16
SRPRA-206ENST00000532259 IPPQ9Y573 584 aa16.04■□□□□ 0.16
SRPRA-206ENST00000532259 SMIM23A6NLE4 172 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 PFKMP08237 780 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 TM4SF4P48230 202 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 KLF1Q13351 362 aaPredicted RBP16.03■□□□□ 0.16
SRPRA-206ENST00000532259 TAF5Q15542 800 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 SOWAHAQ2M3V2 549 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 GOLGA7BQ2TAP0 167 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 FAM102AQ5T9C2 384 aaPredicted RBP16.03■□□□□ 0.16
SRPRA-206ENST00000532259 C9orf57Q5W0N0 161 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 TWF2Q6IBS0 349 aaKnown RBP16.03■□□□□ 0.16
SRPRA-206ENST00000532259 PWWP2AQ96N64 755 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 NT5C1AQ9BXI3 368 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 PLEKHA5Q9HAU0 1116 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 GOLGA8KD6RF30 607 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 E5RJQ4 531 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 PODXLO00592 558 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 IL1R2P27930 398 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 CCND3P30281 292 aaPredicted RBP16.03■□□□□ 0.16
SRPRA-206ENST00000532259 HOXC8P31273 242 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 MKI67P46013 3256 aaKnown RBP16.03■□□□□ 0.16
SRPRA-206ENST00000532259 FNTAP49354 379 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 CDO1Q16878 200 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 SLITRK1Q96PX8 696 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 CNTN3Q9P232 1028 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 Q9Y3F1 56 aa16.03■□□□□ 0.16
SRPRA-206ENST00000532259 SHBGP04278 402 aa16.02■□□□□ 0.16
SRPRA-206ENST00000532259 FGFR1P11362 822 aa16.02■□□□□ 0.16
SRPRA-206ENST00000532259 VDRP11473 427 aa16.02■□□□□ 0.16
SRPRA-206ENST00000532259 LMO2P25791 158 aa16.02■□□□□ 0.16
SRPRA-206ENST00000532259 HPDP32754 393 aaPredicted RBP16.02■□□□□ 0.16
SRPRA-206ENST00000532259 CRYBB1P53674 252 aaPredicted RBP16.02■□□□□ 0.16
SRPRA-206ENST00000532259 CACNB2Q08289 660 aaPredicted RBP16.02■□□□□ 0.16
SRPRA-206ENST00000532259 IRF5Q13568 498 aa16.02■□□□□ 0.16
SRPRA-206ENST00000532259 CNGA2Q16280 664 aa16.02■□□□□ 0.16
SRPRA-206ENST00000532259 OR6B2Q6IFH4 312 aa16.02■□□□□ 0.16
SRPRA-206ENST00000532259 TRNP1Q6NT89 227 aa16.02■□□□□ 0.16
SRPRA-206ENST00000532259 PPP1R2P3Q6NXS1 205 aa16.02■□□□□ 0.16
SRPRA-206ENST00000532259 BEST2Q8NFU1 509 aa16.02■□□□□ 0.16
SRPRA-206ENST00000532259 EXD1Q8NHP7 514 aa16.02■□□□□ 0.16
SRPRA-206ENST00000532259 C10orf88Q9H8K7 445 aa16.02■□□□□ 0.16
SRPRA-206ENST00000532259 STRIP2Q9ULQ0 834 aa16.02■□□□□ 0.16
SRPRA-206ENST00000532259 H0YGN5 161 aa16.02■□□□□ 0.15
SRPRA-206ENST00000532259 TP73O15350 636 aa16.02■□□□□ 0.15
SRPRA-206ENST00000532259 LRCH4O75427 683 aa16.02■□□□□ 0.15
SRPRA-206ENST00000532259 ZNF844Q08AG5 666 aa16.02■□□□□ 0.15
SRPRA-206ENST00000532259 GSTA5Q7RTV2 222 aa16.02■□□□□ 0.15
SRPRA-206ENST00000532259 TTC30AQ86WT1 665 aa16.02■□□□□ 0.15
SRPRA-206ENST00000532259 CD302Q8IX05 232 aa16.02■□□□□ 0.15
SRPRA-206ENST00000532259 EIF1ADQ8N9N8 165 aaKnown RBP16.02■□□□□ 0.15
SRPRA-206ENST00000532259 C12orf50Q8NA57 414 aaPredicted RBP16.02■□□□□ 0.15
SRPRA-206ENST00000532259 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.02■□□□□ 0.15
SRPRA-206ENST00000532259 KATNAL1Q9BW62 490 aa16.02■□□□□ 0.15
SRPRA-206ENST00000532259 SEMA4AQ9H3S1 761 aa16.02■□□□□ 0.15
SRPRA-206ENST00000532259 NFS1Q9Y697 457 aa16.02■□□□□ 0.15
SRPRA-206ENST00000532259 CDY2AQ9Y6F7 541 aa16.02■□□□□ 0.15
SRPRA-206ENST00000532259 SIGLEC16A6NMB1 481 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 CD48P09326 243 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 FCGRTP55899 365 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 CDC42EP1Q00587 391 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 PIGHQ14442 188 aaPredicted RBP16.01■□□□□ 0.15
SRPRA-206ENST00000532259 PMF1Q6P1K2 205 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 GLIS1Q8NBF1 620 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 HSPH1Q92598 858 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 DNPEPQ9ULA0 475 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 A8MXQ7 604 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 GABBR2O75899 941 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 ZSCAN5DPP0CG00 497 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 ETS1P14921 441 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 MAN1A1P33908 653 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 ADCY8P40145 1251 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 PMS2P54278 862 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 GJA9P57773 515 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 IFFO1Q0D2I5 559 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 C15orf59Q2T9L4 293 aaPredicted RBP16.01■□□□□ 0.15
SRPRA-206ENST00000532259 NT5DC4Q86YG4 428 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 LPPQ93052 612 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 B3GNT5Q9BYG0 378 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 MIS12Q9H081 205 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 RNF186Q9NXI6 227 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 GTF2IRD1Q9UHL9 959 aa16.01■□□□□ 0.15
SRPRA-206ENST00000532259 GOLGA6L10A6NI86 522 aa16■□□□□ 0.15
SRPRA-206ENST00000532259 CHRNA1P02708 482 aa16■□□□□ 0.15
SRPRA-206ENST00000532259 HMGCRP04035 888 aa16■□□□□ 0.15
SRPRA-206ENST00000532259 CCDC130P13994 396 aa16■□□□□ 0.15
SRPRA-206ENST00000532259 ADORA2BP29275 332 aa16■□□□□ 0.15
SRPRA-206ENST00000532259 ATP11AP98196 1134 aa16■□□□□ 0.15
SRPRA-206ENST00000532259 PLCB3Q01970 1234 aa16■□□□□ 0.15
SRPRA-206ENST00000532259 CALCOCO2Q13137 446 aa16■□□□□ 0.15
SRPRA-206ENST00000532259 SPOCD1Q6ZMY3 1216 aa16■□□□□ 0.15
SRPRA-206ENST00000532259 FAM183BPQ6ZVS7 135 aa16■□□□□ 0.15
SRPRA-206ENST00000532259 B4GALNT4Q76KP1 1039 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms