RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 CCL16O15467 120 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 KRT5P13647 590 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 ACO1P21399 889 aaKnown RBP23.69■■□□□ 1.38
LRRK1-208ENST00000532029 RFX1P22670 979 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 CYP2F1P24903 491 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 RAD23BP54727 409 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 TWF1Q12792 350 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 AAK1Q2M2I8 961 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 LEXMQ3ZCV2 418 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 CYP26C1Q6V0L0 522 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 ELMOD1Q8N336 334 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 SLC4A11Q8NBS3 891 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 SMRP1Q8NCR6 262 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 SMG7Q92540 1137 aaKnown RBP23.69■■□□□ 1.38
LRRK1-208ENST00000532029 NAP1L5Q96NT1 182 aaPredicted RBP23.69■■□□□ 1.38
LRRK1-208ENST00000532029 B3GNT5Q9BYG0 378 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 S1PR5Q9H228 398 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 FAM207AQ9NSI2 230 aaPredicted RBP23.69■■□□□ 1.38
LRRK1-208ENST00000532029 FAM49BQ9NUQ9 324 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 SIK3Q9Y2K2 1263 aa23.69■■□□□ 1.38
LRRK1-208ENST00000532029 MTCL1Q9Y4B5 1905 aaKnown RBP23.69■■□□□ 1.38
LRRK1-208ENST00000532029 TEX33O43247 280 aa23.68■■□□□ 1.38
LRRK1-208ENST00000532029 BDNFP23560 247 aa23.68■■□□□ 1.38
LRRK1-208ENST00000532029 MAGEA11P43364 429 aa23.68■■□□□ 1.38
LRRK1-208ENST00000532029 KLK7P49862 253 aa23.68■■□□□ 1.38
LRRK1-208ENST00000532029 EPHB3P54753 998 aa23.68■■□□□ 1.38
LRRK1-208ENST00000532029 UBASH3AP57075 661 aa23.68■■□□□ 1.38
LRRK1-208ENST00000532029 RPL10AP62906 217 aaKnown RBP23.68■■□□□ 1.38
LRRK1-208ENST00000532029 SMAD4Q13485 552 aaKnown RBP23.68■■□□□ 1.38
LRRK1-208ENST00000532029 IQCEQ6IPM2 695 aa23.68■■□□□ 1.38
LRRK1-208ENST00000532029 GPR149Q86SP6 731 aa23.68■■□□□ 1.38
LRRK1-208ENST00000532029 SCN4BQ8IWT1 228 aa23.68■■□□□ 1.38
LRRK1-208ENST00000532029 C12orf29Q8N999 325 aa23.68■■□□□ 1.38
LRRK1-208ENST00000532029 RBBP8NLQ8NC74 664 aaPredicted RBP23.68■■□□□ 1.38
LRRK1-208ENST00000532029 NEK11Q8NG66 645 aa23.68■■□□□ 1.38
LRRK1-208ENST00000532029 RIPOR3Q96MK2 946 aa23.68■■□□□ 1.38
LRRK1-208ENST00000532029 RHOBTB2Q9BYZ6 727 aa23.68■■□□□ 1.38
LRRK1-208ENST00000532029 DAAM1Q9Y4D1 1078 aa23.68■■□□□ 1.38
LRRK1-208ENST00000532029 CLDN5O00501 218 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 SOAT2O75908 522 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 POU2F2P09086 479 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 CCDC130P13994 396 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 UCHL3P15374 230 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 CD19P15391 556 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 USP8P40818 1118 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 TFF2Q03403 129 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 RAPGEF1Q13905 1077 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 PUS10Q3MIT2 529 aaKnown RBP23.67■■□□□ 1.38
LRRK1-208ENST00000532029 ATAT1Q5SQI0 421 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 DPY19L2P1Q6NXN4 242 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 VSTM1Q6UX27 236 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 FAM35AQ86V20 835 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 SLC2A14Q8TDB8 520 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 ZNF707Q96C28 371 aaPredicted RBP23.67■■□□□ 1.38
LRRK1-208ENST00000532029 CYFIP2Q96F07 1278 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 ZNF518BQ9C0D4 1074 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 KIAA1257Q9ULG3 409 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 FAM50BQ9Y247 325 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 FHOD1Q9Y613 1164 aa23.67■■□□□ 1.38
LRRK1-208ENST00000532029 MBTPS2O43462 519 aa23.66■■□□□ 1.38
LRRK1-208ENST00000532029 TPM3P06753 285 aa23.66■■□□□ 1.38
LRRK1-208ENST00000532029 PAEPP09466 180 aa23.66■■□□□ 1.38
LRRK1-208ENST00000532029 ADORA2BP29275 332 aa23.66■■□□□ 1.38
LRRK1-208ENST00000532029 GRIK1P39086 918 aa23.66■■□□□ 1.38
LRRK1-208ENST00000532029 MTHFRP42898 656 aa23.66■■□□□ 1.38
LRRK1-208ENST00000532029 NR1I3Q14994 352 aa23.66■■□□□ 1.38
LRRK1-208ENST00000532029 VEPH1Q14D04 833 aa23.66■■□□□ 1.38
LRRK1-208ENST00000532029 SMYD5Q6GMV2 418 aa23.66■■□□□ 1.38
LRRK1-208ENST00000532029 SHC3Q92529 594 aa23.66■■□□□ 1.38
LRRK1-208ENST00000532029 ZNF512Q96ME7 567 aaPredicted RBP23.66■■□□□ 1.38
LRRK1-208ENST00000532029 HNRNPABQ99729 332 aaKnown RBP23.66■■□□□ 1.38
LRRK1-208ENST00000532029 GANQ9H2C0 597 aa23.66■■□□□ 1.38
LRRK1-208ENST00000532029 AJAP1Q9UKB5 411 aaPredicted RBP23.66■■□□□ 1.38
LRRK1-208ENST00000532029 USP15Q9Y4E8 981 aaPredicted RBP23.66■■□□□ 1.38
LRRK1-208ENST00000532029 TRIM66O15016 1216 aa23.65■■□□□ 1.38
LRRK1-208ENST00000532029 PAPLNO95428 1278 aa23.65■■□□□ 1.38
LRRK1-208ENST00000532029 VDRP11473 427 aa23.65■■□□□ 1.38
LRRK1-208ENST00000532029 ANXA13P27216 316 aa23.65■■□□□ 1.38
LRRK1-208ENST00000532029 POLR2FP61218 127 aaKnown RBP23.65■■□□□ 1.38
LRRK1-208ENST00000532029 DDR2Q16832 855 aa23.65■■□□□ 1.38
LRRK1-208ENST00000532029 SGO2Q562F6 1265 aa23.65■■□□□ 1.38
LRRK1-208ENST00000532029 ITIH5Q86UX2 942 aa23.65■■□□□ 1.38
LRRK1-208ENST00000532029 FUKQ8N0W3 1084 aa23.65■■□□□ 1.38
LRRK1-208ENST00000532029 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.65■■□□□ 1.38
LRRK1-208ENST00000532029 SMARCD1Q96GM5 515 aa23.65■■□□□ 1.38
LRRK1-208ENST00000532029 NECTIN4Q96NY8 510 aa23.65■■□□□ 1.38
LRRK1-208ENST00000532029 IFNKQ9P0W0 207 aa23.65■■□□□ 1.38
LRRK1-208ENST00000532029 CNTN6Q9UQ52 1028 aa23.65■■□□□ 1.38
LRRK1-208ENST00000532029 ASB3Q9Y575 518 aa23.65■■□□□ 1.38
LRRK1-208ENST00000532029 A0A1W2PQC6 194 aa23.64■■□□□ 1.37
LRRK1-208ENST00000532029 GRXCR2A6NFK2 248 aa23.64■■□□□ 1.37
LRRK1-208ENST00000532029 CBFA2T2O43439 604 aa23.64■■□□□ 1.37
LRRK1-208ENST00000532029 AP1G2O75843 785 aa23.64■■□□□ 1.37
LRRK1-208ENST00000532029 ATF6P18850 670 aa23.64■■□□□ 1.37
LRRK1-208ENST00000532029 GPR15P49685 360 aa23.64■■□□□ 1.37
LRRK1-208ENST00000532029 ZNF132P52740 706 aa23.64■■□□□ 1.37
LRRK1-208ENST00000532029 DRAP1Q14919 205 aaPredicted RBP23.64■■□□□ 1.37
LRRK1-208ENST00000532029 TAF12Q16514 161 aa23.64■■□□□ 1.37
LRRK1-208ENST00000532029 PTCRAQ6ISU1 281 aaPredicted RBP23.64■■□□□ 1.37
LRRK1-208ENST00000532029 PAQR9Q6ZVX9 377 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms