RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 PLS3P13797 630 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 ENGP17813 658 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 CSRP1P21291 193 aaKnown RBP9.69□□□□□ -0.86
USF1-210ENST00000531842 DRD1P21728 446 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 ACAT1P24752 427 aaKnown RBP9.69□□□□□ -0.86
USF1-210ENST00000531842 CYP2F1P24903 491 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 WEE1P30291 646 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 OPRD1P41143 372 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 SLC6A11P48066 632 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 ACOT2P49753 483 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 ZXDBP98169 803 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 GOLGA4Q13439 2230 aaKnown RBP9.69□□□□□ -0.86
USF1-210ENST00000531842 DHX8Q14562 1220 aaKnown RBP9.69□□□□□ -0.86
USF1-210ENST00000531842 MTF1Q14872 753 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 VEPH1Q14D04 833 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 ZNF77Q15935 545 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 EML3Q32P44 896 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 SOWAHCQ53LP3 525 aaPredicted RBP9.69□□□□□ -0.86
USF1-210ENST00000531842 TRIM61Q5EBN2 209 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 ARSHQ5FYA8 562 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 SPATA1Q5VX52 437 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 CC2D1AQ6P1N0 951 aaPredicted RBP9.69□□□□□ -0.86
USF1-210ENST00000531842 MARCH9Q86YJ5 346 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 CCDC83Q8IWF9 413 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 ARL14EPQ8N8R7 260 aaPredicted RBP9.69□□□□□ -0.86
USF1-210ENST00000531842 IGSF22Q8N9C0 903 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 ZSWIM2Q8NEG5 633 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 USP33Q8TEY7 942 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 BBC3Q96PG8 261 aaPredicted RBP9.69□□□□□ -0.86
USF1-210ENST00000531842 DUS2Q9NX74 493 aaKnown RBP9.69□□□□□ -0.86
USF1-210ENST00000531842 EBF1Q9UH73 591 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 RBM19Q9Y4C8 960 aaKnown RBP9.69□□□□□ -0.86
USF1-210ENST00000531842 SHROOM3Q8TF72 1996 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 ANO9A1A5B4 782 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 SOBPA7XYQ1 873 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 PIRO00625 290 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 PRPF40AO75400 957 aaKnown RBP9.68□□□□□ -0.86
USF1-210ENST00000531842 CAPNS1P04632 268 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 CYP11A1P05108 521 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 CYP3A5P20815 502 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 MUTP22033 750 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 ITPKAP23677 461 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 IFNAR2P48551 515 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 NEK4P51957 841 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 COL28A1Q2UY09 1125 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 USP39Q53GS9 565 aaKnown RBP9.68□□□□□ -0.86
USF1-210ENST00000531842 ZPBP2Q6X784 338 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 MON1AQ86VX9 555 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 OSTM1Q86WC4 334 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 C12orf40Q86WS4 652 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 EFCAB13Q8IY85 973 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 ALLCQ8N6M5 410 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 PNPLA1Q8N8W4 532 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 C8orf76Q96K31 380 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 NTPCRQ9BSD7 190 aaKnown RBP9.68□□□□□ -0.86
USF1-210ENST00000531842 GTPBP2Q9BX10 602 aaKnown RBP9.68□□□□□ -0.86
USF1-210ENST00000531842 RPF1Q9H9Y2 349 aaKnown RBP9.68□□□□□ -0.86
USF1-210ENST00000531842 PLEKHA5Q9HAU0 1116 aa9.68□□□□□ -0.86
USF1-210ENST00000531842 KNL1Q8NG31 2342 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 TMEM8BA6NDV4 472 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 SGK1O00141 431 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 OGTO15294 1046 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 EIF5BO60841 1220 aaKnown RBP9.67□□□□□ -0.86
USF1-210ENST00000531842 KLF8O95600 359 aaPredicted RBP9.67□□□□□ -0.86
USF1-210ENST00000531842 FGF19O95750 216 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 CHRM1P11229 460 aaPredicted RBP9.67□□□□□ -0.86
USF1-210ENST00000531842 GUCY2CP25092 1073 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 TIE1P35590 1138 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 TUFMP49411 452 aaKnown RBP9.67□□□□□ -0.86
USF1-210ENST00000531842 LIG4P49917 911 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 SLC12A3P55017 1021 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 NCKAP1LP55160 1127 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 KDSRQ06136 332 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 USP4Q13107 963 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 GNL2Q13823 731 aaKnown RBP9.67□□□□□ -0.86
USF1-210ENST00000531842 TMEM132DQ14C87 1099 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 KARSQ15046 597 aaKnown RBP9.67□□□□□ -0.86
USF1-210ENST00000531842 PTPAQ15257 358 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 PIP4P1Q86T03 277 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 RASSF3Q86WH2 238 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 CPA6Q8N4T0 437 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 SH3RF2Q8TEC5 729 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 OSCP1Q8WVF1 389 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 SPIRE2Q8WWL2 714 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 MRPS31Q92665 395 aaKnown RBP9.67□□□□□ -0.86
USF1-210ENST00000531842 CRELD1Q96HD1 420 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 MSTO1Q9BUK6 570 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 CD93Q9NPY3 652 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 CPSF3Q9UKF6 684 aaKnown RBP9.67□□□□□ -0.86
USF1-210ENST00000531842 MSRB2Q9Y3D2 182 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 NEUROG3Q9Y4Z2 214 aa9.67□□□□□ -0.86
USF1-210ENST00000531842 TMEM131Q92545 1883 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 K7ENM7 598 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 HNRNPDLO14979 420 aaKnown RBP9.66□□□□□ -0.86
USF1-210ENST00000531842 ATP2C2O75185 946 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 CFIP05156 583 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 CKMP06732 381 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 ADRB2P07550 413 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 PLA2G4BP0C869 781 aa9.66□□□□□ -0.86
USF1-210ENST00000531842 WASP42768 502 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms