RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 CDT1Q9H211 546 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 SMARCAD1Q9H4L7 1026 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 FAM124BQ9H5Z6 455 aaPredicted RBP17.71■□□□□ 0.43
VPS26B-206ENST00000531741 POLIQ9UNA4 740 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 DNAJC25-GNG10A0A024R161 153 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 LOC102724159A0A0B4J2E5 919 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 CD19P15391 556 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 IL1R2P27930 398 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 OTUD4Q01804 1114 aaKnown RBP17.7■□□□□ 0.42
VPS26B-206ENST00000531741 PLCB3Q01970 1234 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 PWP2Q15269 919 aaKnown RBP17.7■□□□□ 0.42
VPS26B-206ENST00000531741 HIF1AQ16665 826 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 EFHC2Q5JST6 749 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 EEF1DP3Q658K8 133 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 CGB2Q6NT52 195 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 CCDC62Q6P9F0 684 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 ZBED8Q8IZ13 594 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 CMASQ8NFW8 434 aaPredicted RBP17.7■□□□□ 0.42
VPS26B-206ENST00000531741 JOSD2Q8TAC2 188 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 ACSF2Q96CM8 615 aaPredicted RBP17.7■□□□□ 0.42
VPS26B-206ENST00000531741 TRABDQ9H4I3 376 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 CYP3A43Q9HB55 503 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 NXF1Q9UBU9 619 aaKnown RBP17.7■□□□□ 0.42
VPS26B-206ENST00000531741 PPP1R1BQ9UD71 204 aaPredicted RBP17.7■□□□□ 0.42
VPS26B-206ENST00000531741 E7ESA3 106 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 INO80B-WBP1J3KQ70 363 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 TSHRP16473 764 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 ATICP31939 592 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 FOXN2P32314 431 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 MYO1EQ12965 1108 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 PDIA2Q13087 525 aaKnown RBP17.7■□□□□ 0.42
VPS26B-206ENST00000531741 FAM133BQ5BKY9 247 aaKnown RBP17.7■□□□□ 0.42
VPS26B-206ENST00000531741 KIAA0319LQ8IZA0 1049 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 C1orf127Q8N9H9 656 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 SPATA33Q96N06 139 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 CPXM1Q96SM3 734 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 INO80BQ9C086 356 aaPredicted RBP17.7■□□□□ 0.42
VPS26B-206ENST00000531741 VPS37BQ9H9H4 285 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 PRMT7Q9NVM4 692 aaPredicted RBP17.7■□□□□ 0.42
VPS26B-206ENST00000531741 KLHL14Q9P2G3 628 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 PSMC3IPQ9P2W1 217 aaPredicted RBP17.7■□□□□ 0.42
VPS26B-206ENST00000531741 ZMYND8Q9ULU4 1186 aaPredicted RBP17.7■□□□□ 0.42
VPS26B-206ENST00000531741 AGAP1Q9UPQ3 857 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 STARD13Q9Y3M8 1113 aa17.7■□□□□ 0.42
VPS26B-206ENST00000531741 ZSWIM8A7E2V4 1837 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 GOLGA8SH3BPF8 625 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 B4GALT5O43286 388 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 CST8O60676 142 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 IFNB1P01574 187 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 CXCL8P10145 99 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 CTCFP49711 727 aaPredicted RBP17.69■□□□□ 0.42
VPS26B-206ENST00000531741 ARL4CP56559 192 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 NCALDP61601 193 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 PTPN11Q06124 597 aaPredicted RBP17.69■□□□□ 0.42
VPS26B-206ENST00000531741 SPARCL1Q14515 664 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 GADL1Q6ZQY3 521 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 CEP120Q8N960 986 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 NAT8LQ8N9F0 302 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 SLC4A11Q8NBS3 891 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 CXorf38Q8TB03 319 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 CNKSR2Q8WXI2 1034 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 HAUS1Q96CS2 278 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 MCRS1Q96EZ8 462 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 NLRP4Q96MN2 994 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 SMC6Q96SB8 1091 aa17.69■□□□□ 0.42
VPS26B-206ENST00000531741 ASCC2Q9H1I8 757 aaPredicted RBP17.69■□□□□ 0.42
VPS26B-206ENST00000531741 CXCL11O14625 94 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 CILPO75339 1184 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 SLC8A1P32418 973 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 PHBP35232 272 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 SKIV2L2P42285 1042 aaKnown RBP17.68■□□□□ 0.42
VPS26B-206ENST00000531741 TNFAIP2Q03169 654 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 EFCAB12Q6NXP0 572 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 FAM228AQ86W67 206 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 IFNLR1Q8IU57 520 aaPredicted RBP17.68■□□□□ 0.42
VPS26B-206ENST00000531741 DHX37Q8IY37 1157 aaKnown RBP17.68■□□□□ 0.42
VPS26B-206ENST00000531741 ATP11CQ8NB49 1132 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 CPT1BQ92523 772 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 PITPNM3Q9BZ71 974 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 SDCBP2Q9H190 292 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 ZWILCHQ9H900 591 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 CD248Q9HCU0 757 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 DICER1Q9UPY3 1922 aaKnown RBP17.68■□□□□ 0.42
VPS26B-206ENST00000531741 POC1B-GALNT4F8VUJ3 575 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 APOC4-APOC2K7ER74 178 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 APOC2P02655 101 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 HMGCRP04035 888 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 ERBB2P04626 1255 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 MCF2P10911 925 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 PCK1P35558 622 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 RAP1GAPP47736 663 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 GEMIN4P57678 1058 aaKnown RBP17.68■□□□□ 0.42
VPS26B-206ENST00000531741 GPX6P59796 221 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 SF3A3Q12874 501 aaKnown RBP eCLIP17.68■□□□□ 0.42
VPS26B-206ENST00000531741 ZKSCAN8Q15776 578 aaPredicted RBP17.68■□□□□ 0.42
VPS26B-206ENST00000531741 PKN2Q16513 984 aaKnown RBP17.68■□□□□ 0.42
VPS26B-206ENST00000531741 PDK4Q16654 411 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 DHRS4Q9BTZ2 278 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 ASB7Q9H672 318 aa17.68■□□□□ 0.42
VPS26B-206ENST00000531741 TJP2Q9UDY2 1190 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms