RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 TMEM196Q5HYL7 178 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 IL31Q6EBC2 164 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 FSTL4Q6MZW2 842 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 FAM173BQ6P4H8 233 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 MON1AQ86VX9 555 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 DNAJC19Q96DA6 116 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 ANKRD36BP1Q96IX9 119 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 HHIPQ96QV1 700 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 FAM83CQ9BQN1 747 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 ACBD6Q9BR61 282 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 PDE11AQ9HCR9 933 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 ABCB6Q9NP58 842 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 OLFML3Q9NRN5 406 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 PANK4Q9NVE7 773 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 GTF3C4Q9UKN8 822 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 SRPRBQ9Y5M8 271 aaKnown RBP16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 AXIN1O15169 862 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 GDF9O60383 454 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 FOXD2O60548 495 aaPredicted RBP16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 TADA3O75528 432 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 EGFP01133 1207 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 TNNC2P02585 160 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 RBP5P82980 135 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 MYO1EQ12965 1108 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 RESTQ13127 1097 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 PSMD2Q13200 908 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 STXBP4Q6ZWJ1 553 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 PDILTQ8N807 584 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 FSIP1Q8NA03 581 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 GAB3Q8WWW8 586 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 P2RY13Q9BPV8 354 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 FGFBP2Q9BYJ0 223 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 PANK2Q9BZ23 570 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 DUS2Q9NX74 493 aaKnown RBP16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 WNT6Q9Y6F9 365 aa16.97■□□□□ 0.31
CHMP4A-204ENST00000530996 OTOL1A6NHN0 477 aaPredicted RBP16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 HCRTO43612 131 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 NOL4O94818 638 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 PRPF6O94906 941 aaKnown RBP16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 CLSTN1O94985 981 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 USP17L7P0C7H9 530 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 HOXA6P31267 233 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 LHX1P48742 406 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 PSMC1P62191 440 aaKnown RBP16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 FAM160A1Q05DH4 1040 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 USP4Q13107 963 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 ZNF268Q14587 947 aaPredicted RBP16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 C4orf50Q6ZRC1 276 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 CACNA2D4Q7Z3S7 1137 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 OSTM1Q86WC4 334 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 CCDC65Q8IXS2 484 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 GPD1LQ8N335 351 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 TOP6BLQ8N6T0 577 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 RPLP0P6Q8NHW5 317 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 RIN3Q8TB24 985 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 ATP2A3Q93084 1043 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 CHFRQ96EP1 664 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 SYT15Q9BQS2 421 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 STRA6Q9BX79 667 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 ARRDC1-AS1Q9H2J1 176 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 TMEM206Q9H813 350 aa16.96■□□□□ 0.31
CHMP4A-204ENST00000530996 SCN1AP35498 2009 aa16.96■□□□□ 0.3
CHMP4A-204ENST00000530996 TRDMT1O14717 391 aaKnown RBP16.95■□□□□ 0.3
CHMP4A-204ENST00000530996 DRD1P21728 446 aa16.95■□□□□ 0.3
CHMP4A-204ENST00000530996 ANXA13P27216 316 aa16.95■□□□□ 0.3
CHMP4A-204ENST00000530996 SF3A2Q15428 464 aaKnown RBP16.95■□□□□ 0.3
CHMP4A-204ENST00000530996 NAIF1Q69YI7 327 aaPredicted RBP16.95■□□□□ 0.3
CHMP4A-204ENST00000530996 KBTBD6Q86V97 674 aa16.95■□□□□ 0.3
CHMP4A-204ENST00000530996 ACDQ96AP0 544 aa16.95■□□□□ 0.3
CHMP4A-204ENST00000530996 TRMT2BQ96GJ1 504 aaKnown RBP16.95■□□□□ 0.3
CHMP4A-204ENST00000530996 MMS19Q96T76 1030 aa16.95■□□□□ 0.3
CHMP4A-204ENST00000530996 GDAP2Q9NXN4 497 aa16.95■□□□□ 0.3
CHMP4A-204ENST00000530996 EPN2O95208 641 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 ADRB1P08588 477 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 CYP27A1Q02318 531 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 CUL4AQ13619 759 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 ZNF77Q15935 545 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 CFAP221Q4G0U5 840 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 FBXO43Q4G163 708 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 ARL14EPQ8N8R7 260 aaPredicted RBP16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 SPATA18Q8TC71 538 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 SH3RF2Q8TEC5 729 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 OSCP1Q8WVF1 389 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 CD101Q93033 1021 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 MYLPFQ96A32 169 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 FUBP3Q96I24 572 aaKnown RBP eCLIP16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 HPDLQ96IR7 371 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 ECT2Q9H8V3 914 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 POLR3BQ9NW08 1133 aaPredicted RBP16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 SIX4Q9UIU6 781 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 ANK1P16157 1881 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 SPTBN2O15020 2390 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 TCHHQ07283 1943 aa16.94■□□□□ 0.3
CHMP4A-204ENST00000530996 A0A087X0B3 334 aa16.93■□□□□ 0.3
CHMP4A-204ENST00000530996 C2orf78A6NCI8 922 aa16.93■□□□□ 0.3
CHMP4A-204ENST00000530996 SOBPA7XYQ1 873 aa16.93■□□□□ 0.3
CHMP4A-204ENST00000530996 KIAA0391O15091 583 aaKnown RBP16.93■□□□□ 0.3
CHMP4A-204ENST00000530996 SYT1P21579 422 aa16.93■□□□□ 0.3
CHMP4A-204ENST00000530996 GJA4P35212 333 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms