RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 PALLDQ8WX93 1383 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 LRRC14BA6NHZ5 514 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 SLC43A1O75387 559 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 ALDH1L1O75891 902 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 PDGFRBP09619 1106 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 MALP21145 153 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 HMGB2P26583 209 aaKnown RBP8.77□□□□□ -1.01
CSDE1-213ENST00000530784 SCAPQ12770 1279 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 SNAPC2Q13487 334 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 FAM43AQ8N2R8 423 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 BOD1Q96IK1 185 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 TLR10Q9BXR5 811 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 SLITRK6Q9H5Y7 841 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 JKAMPQ9P055 326 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 KCNE5Q9UJ90 142 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 SLC45A2Q9UMX9 530 aa8.77□□□□□ -1.01
CSDE1-213ENST00000530784 MTO1Q9Y2Z2 717 aaKnown RBP8.77□□□□□ -1.01
CSDE1-213ENST00000530784 C5P01031 1676 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 ERN1O75460 977 aaKnown RBP8.76□□□□□ -1.01
CSDE1-213ENST00000530784 POU2F2P09086 479 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 EGR2P11161 476 aaPredicted RBP8.76□□□□□ -1.01
CSDE1-213ENST00000530784 PROZP22891 400 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 TAP1Q03518 808 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 CYP2A13Q16696 494 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 HECTD2Q5U5R9 776 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.76□□□□□ -1.01
CSDE1-213ENST00000530784 CATIPQ7Z7H3 387 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 GPR149Q86SP6 731 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 COL23A1Q86Y22 540 aaPredicted RBP8.76□□□□□ -1.01
CSDE1-213ENST00000530784 PRR18Q8N4B5 295 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 GPR150Q8NGU9 434 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 GALNT9Q9HCQ5 603 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 TMEM74BQ9NUR3 256 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 SYBUQ9NX95 663 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 IP6K2Q9UHH9 426 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 PACSIN3Q9UKS6 424 aa8.76□□□□□ -1.01
CSDE1-213ENST00000530784 PKD1L3Q7Z443 1732 aa8.75□□□□□ -1.01
CSDE1-213ENST00000530784 NCAPD2Q15021 1401 aa8.75□□□□□ -1.01
CSDE1-213ENST00000530784 PPM1GO15355 546 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-213ENST00000530784 ZFPL1O95159 310 aa8.75□□□□□ -1.01
CSDE1-213ENST00000530784 ITGAMP11215 1152 aa8.75□□□□□ -1.01
CSDE1-213ENST00000530784 FXR1P51114 621 aaKnown RBP eCLIP8.75□□□□□ -1.01
CSDE1-213ENST00000530784 USP14P54578 494 aa8.75□□□□□ -1.01
CSDE1-213ENST00000530784 ABHD17BQ5VST6 288 aa8.75□□□□□ -1.01
CSDE1-213ENST00000530784 USP45Q70EL2 814 aa8.75□□□□□ -1.01
CSDE1-213ENST00000530784 ZNF365Q70YC5 407 aa8.75□□□□□ -1.01
CSDE1-213ENST00000530784 TCF7L1Q9HCS4 588 aa8.75□□□□□ -1.01
CSDE1-213ENST00000530784 MAN1C1Q9NR34 630 aa8.75□□□□□ -1.01
CSDE1-213ENST00000530784 VSX1Q9NZR4 365 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-213ENST00000530784 TOGARAM1Q9Y4F4 1720 aa8.74□□□□□ -1.01
CSDE1-213ENST00000530784 NT5C1B-RDH14C9J2C7 533 aa8.74□□□□□ -1.01
CSDE1-213ENST00000530784 F2RL2O00254 374 aa8.74□□□□□ -1.01
CSDE1-213ENST00000530784 C1QTNF8P60827 252 aa8.74□□□□□ -1.01
CSDE1-213ENST00000530784 COL10A1Q03692 680 aa8.74□□□□□ -1.01
CSDE1-213ENST00000530784 TTF1Q15361 905 aaPredicted RBP8.74□□□□□ -1.01
CSDE1-213ENST00000530784 SLC4A10Q6U841 1118 aa8.74□□□□□ -1.01
CSDE1-213ENST00000530784 Q8NA96 180 aa8.74□□□□□ -1.01
CSDE1-213ENST00000530784 C3orf20Q8ND61 904 aa8.74□□□□□ -1.01
CSDE1-213ENST00000530784 KLHL32Q96NJ5 620 aa8.74□□□□□ -1.01
CSDE1-213ENST00000530784 MED15Q96RN5 788 aa8.74□□□□□ -1.01
CSDE1-213ENST00000530784 CDYLQ9Y232 598 aa8.74□□□□□ -1.01
CSDE1-213ENST00000530784 PCDHA3Q9Y5H8 950 aa8.74□□□□□ -1.01
CSDE1-213ENST00000530784 EPN1Q9Y6I3 576 aaPredicted RBP8.74□□□□□ -1.01
CSDE1-213ENST00000530784 C4BP0C0L5 1744 aa8.74□□□□□ -1.01
CSDE1-213ENST00000530784 ANKRD26Q9UPS8 1709 aa8.74□□□□□ -1.01
CSDE1-213ENST00000530784 HKR1P10072 659 aa8.73□□□□□ -1.01
CSDE1-213ENST00000530784 MCL1Q07820 350 aa8.73□□□□□ -1.01
CSDE1-213ENST00000530784 SUPT20HQ8NEM7 779 aa8.73□□□□□ -1.01
CSDE1-213ENST00000530784 TMIEQ8NEW7 156 aa8.73□□□□□ -1.01
CSDE1-213ENST00000530784 LINC00476Q8WZB0 136 aa8.73□□□□□ -1.01
CSDE1-213ENST00000530784 FUBP1Q96AE4 644 aaKnown RBP8.73□□□□□ -1.01
CSDE1-213ENST00000530784 GTPBP4Q9BZE4 634 aaKnown RBP8.73□□□□□ -1.01
CSDE1-213ENST00000530784 TOR3AQ9H497 397 aa8.73□□□□□ -1.01
CSDE1-213ENST00000530784 TESQ9UGI8 421 aaKnown RBP8.73□□□□□ -1.01
CSDE1-213ENST00000530784 CHD4Q14839 1912 aa8.72□□□□□ -1.01
CSDE1-213ENST00000530784 SUV39H1O43463 412 aa8.72□□□□□ -1.01
CSDE1-213ENST00000530784 DTNBO60941 627 aa8.72□□□□□ -1.01
CSDE1-213ENST00000530784 ABLIM3O94929 683 aa8.72□□□□□ -1.01
CSDE1-213ENST00000530784 PF4V1P10720 104 aa8.72□□□□□ -1.01
CSDE1-213ENST00000530784 TGM1P22735 817 aa8.72□□□□□ -1.01
CSDE1-213ENST00000530784 SMARCA1P28370 1054 aa8.72□□□□□ -1.01
CSDE1-213ENST00000530784 GEN1Q17RS7 908 aa8.72□□□□□ -1.01
CSDE1-213ENST00000530784 CRB2Q5IJ48 1285 aa8.72□□□□□ -1.01
CSDE1-213ENST00000530784 CAVIN3Q969G5 261 aa8.72□□□□□ -1.01
CSDE1-213ENST00000530784 COQ10AQ96MF6 247 aa8.72□□□□□ -1.01
CSDE1-213ENST00000530784 UNKLQ9H9P5 680 aaKnown RBP8.72□□□□□ -1.01
CSDE1-213ENST00000530784 POLHQ9Y253 713 aa8.72□□□□□ -1.01
CSDE1-213ENST00000530784 ANKRD6Q9Y2G4 727 aa8.72□□□□□ -1.01
CSDE1-213ENST00000530784 UTRNP46939 3433 aa8.71□□□□□ -1.01
CSDE1-213ENST00000530784 RHOBTB3O94955 611 aa8.71□□□□□ -1.02
CSDE1-213ENST00000530784 AVPR1BP47901 424 aa8.71□□□□□ -1.02
CSDE1-213ENST00000530784 VAV2P52735 878 aa8.71□□□□□ -1.02
CSDE1-213ENST00000530784 PURAQ00577 322 aaKnown RBP8.71□□□□□ -1.02
CSDE1-213ENST00000530784 FOXI1Q12951 378 aa8.71□□□□□ -1.02
CSDE1-213ENST00000530784 CCDC93Q567U6 631 aa8.71□□□□□ -1.02
CSDE1-213ENST00000530784 SLC17A8Q8NDX2 589 aa8.71□□□□□ -1.02
CSDE1-213ENST00000530784 PIGBQ92521 554 aa8.71□□□□□ -1.02
CSDE1-213ENST00000530784 RGMAQ96B86 450 aa8.71□□□□□ -1.02
CSDE1-213ENST00000530784 Q96MF0 132 aa8.71□□□□□ -1.02
CSDE1-213ENST00000530784 POLR3GLQ9BT43 218 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms