RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, human

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPRIN1-208	ENST00000530008	EFCAB12	Q6NXP0	572 aa		7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	FAM111B	Q6SJ93	734 aa		7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	KCTD20	Q7Z5Y7	419 aa		7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	FAM83A	Q86UY5	434 aa		7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	HEATR4	Q86WZ0	1026 aa		7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	GPR135	Q8IZ08	494 aa		7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	SCAMP5	Q8TAC9	235 aa		7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	AFG1L	Q8WV93	481 aa		7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	NEUROD6	Q96NK8	337 aa		7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	RBM15	Q96T37	977 aa	Known RBP eCLIP	7.38	□□□□□ -1.23	1e-7	■■■□□ 14.6
CAPRIN1-208	ENST00000530008	TP63	Q9H3D4	680 aa	Predicted RBP	7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	C12orf65	Q9H3J6	166 aa	Known RBP	7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	FAM83D	Q9H4H8	585 aa		7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	SEPSECS	Q9HD40	501 aa	Known RBP	7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	ETAA1	Q9NY74	926 aa		7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	DNMT3B	Q9UBC3	853 aa	Known RBP	7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	NRBP1	Q9UHY1	535 aa		7.38	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	SCO2	A0A1W2PP80	73 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	hCG_1984214	I3L0E3	225 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	ETV2	O00321	342 aa	Predicted RBP	7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	FFAR3	O14843	346 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	DNPH1	O43598	174 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	PRSS23	O95084	383 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	IFIT1	P09914	478 aa	Known RBP	7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	FCER1A	P12319	257 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	CAPN3	P20807	821 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	LIFR	P42702	1097 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	TUB	P50607	506 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	TOB1	P50616	345 aa	Predicted RBP	7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	ALDH18A1	P54886	795 aa	Known RBP	7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	TLE2	Q04725	743 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	SLFN5	Q08AF3	891 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	ZNF750	Q32MQ0	723 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	MGAT5B	Q3V5L5	792 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	CACHD1	Q5VU97	1274 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	MED25	Q71SY5	747 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	TBC1D1	Q86TI0	1168 aa	Predicted RBP	7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	CFAP52	Q8N1V2	620 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	PCYOX1L	Q8NBM8	494 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	NUP133	Q8WUM0	1156 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	HDAC2	Q92769	488 aa	Known RBP	7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	SLC46A2	Q9BY10	475 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	SPON1	Q9HCB6	807 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	SHOC2	Q9UQ13	582 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	HPSE	Q9Y251	543 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	CDY1	Q9Y6F8	540 aa		7.37	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	DYTN	A2CJ06	578 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	POLRMT	O00411	1230 aa	Known RBP	7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	TRIM13	O60858	407 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	PIAS2	O75928	621 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	NTSR2	O95665	410 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	ATXN1L	P0C7T5	689 aa	Known RBP	7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	JUP	P14923	745 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	SLC5A2	P31639	672 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	RAC3	P60763	192 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	KRT17	Q04695	432 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	TRPC3	Q13507	836 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	ATPAF1	Q5TC12	328 aa	Predicted RBP	7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	MZT2B	Q6NZ67	158 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	ZNF761	Q86XN6	746 aa	Predicted RBP	7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	ZNF280B	Q86YH2	543 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	ZFPM1	Q8IX07	1006 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	KCNC2	Q96PR1	638 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	SMO	Q99835	787 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	CPPED1	Q9BRF8	314 aa	Predicted RBP	7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	OSBPL5	Q9H0X9	879 aa	Predicted RBP	7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	TAF1D	Q9H5J8	278 aa	Predicted RBP	7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	EPS8L2	Q9H6S3	715 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	ALG13	Q9NP73	1137 aa	Known RBP	7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	HELLS	Q9NRZ9	838 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	TMOD4	Q9NZQ9	345 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	CDYL	Q9Y232	598 aa		7.36	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	MROH6	A6NGR9	719 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	DRGX	A6NNA5	263 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008		B4E171	279 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	B4GALT4	O60513	344 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	RASAL1	O95294	804 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	SRGAP2B	P0DMP2	458 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	ATP1A3	P13637	1013 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	CHRM3	P20309	590 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	GLDC	P23378	1020 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	TSPAN7	P41732	249 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	BCAT1	P54687	386 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	ACTR2	P61160	394 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	SATB1	Q01826	763 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	PIGF	Q07326	219 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	SCAP	Q12770	1279 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	KCTD2	Q14681	263 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	ZIK1	Q3SY52	487 aa	Predicted RBP	7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	MANEAL	Q5VSG8	457 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	TAPT1	Q6NXT6	567 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	DRICH1	Q6PGQ1	229 aa	Predicted RBP	7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	RASGRP3	Q8IV61	690 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	PSD4	Q8NDX1	1056 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	BPIFB1	Q8TDL5	484 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	RSC1A1	Q92681	617 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	HTRA1	Q92743	480 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	SDCCAG3	Q96C92	435 aa		7.35	□□□□□ -1.23
CAPRIN1-208	ENST00000530008	NEIL1	Q96FI4	390 aa	Predicted RBP	7.35	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms