RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 DNAJC17Q9NVM6 304 aaKnown RBP7.85□□□□□ -1.15
SOX6-208ENST00000527619 ASIC3Q9UHC3 531 aa7.85□□□□□ -1.15
SOX6-208ENST00000527619 RIMKLBQ9ULI2 386 aa7.85□□□□□ -1.15
SOX6-208ENST00000527619 COG5Q9UP83 839 aa7.85□□□□□ -1.15
SOX6-208ENST00000527619 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.85□□□□□ -1.15
SOX6-208ENST00000527619 GIT1Q9Y2X7 761 aa7.85□□□□□ -1.15
SOX6-208ENST00000527619 FRMPD4Q14CM0 1322 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 MROH5Q6ZUA9 1318 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 C10orf71Q711Q0 1435 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 TCRBV7S2A1N4TA0A589 114 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 GOLGA8IPA6NC78 632 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 NOTOA8MTQ0 251 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 IRS4O14654 1257 aaPredicted RBP7.84□□□□□ -1.15
SOX6-208ENST00000527619 STRNO43815 780 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 DNAJC6O75061 913 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 CIB2O75838 187 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 BAG2O95816 211 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 RARBP10826 455 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 UQCRBP14927 111 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 NR2F2P24468 414 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 GNALP38405 381 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 VPS41P49754 854 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 NR1D2Q14995 579 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 ACAP1Q15027 740 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 SIX1Q15475 284 aaPredicted RBP7.84□□□□□ -1.15
SOX6-208ENST00000527619 TRMT5Q32P41 509 aaKnown RBP7.84□□□□□ -1.15
SOX6-208ENST00000527619 FAM47AQ5JRC9 791 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 RBM44Q6ZP01 1051 aaKnown RBP7.84□□□□□ -1.15
SOX6-208ENST00000527619 RNF207Q6ZRF8 634 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 ZNF598Q86UK7 904 aaKnown RBP7.84□□□□□ -1.15
SOX6-208ENST00000527619 RASSF3Q86WH2 238 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 SLC13A5Q86YT5 568 aaPredicted RBP7.84□□□□□ -1.15
SOX6-208ENST00000527619 ALDH16A1Q8IZ83 802 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 SNX29Q8TEQ0 813 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 GAB3Q8WWW8 586 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 PRICKLE1Q96MT3 831 aaPredicted RBP7.84□□□□□ -1.15
SOX6-208ENST00000527619 OSBPL8Q9BZF1 889 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 THAP2Q9H0W7 228 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 TRABDQ9H4I3 376 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 LRRC19Q9H756 370 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 GPAMQ9HCL2 828 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 KANSL3Q9P2N6 904 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 HEY2Q9UBP5 337 aa7.84□□□□□ -1.15
SOX6-208ENST00000527619 SAP30BPQ9UHR5 308 aaKnown RBP7.84□□□□□ -1.15
SOX6-208ENST00000527619 COL1A1P02452 1464 aaPredicted RBP7.84□□□□□ -1.15
SOX6-208ENST00000527619 CDK2AP1O14519 115 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 HAT1O14929 419 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 MUSKO15146 869 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 MAGEB3O15480 346 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 BUD23O43709 281 aaKnown RBP7.84□□□□□ -1.16
SOX6-208ENST00000527619 SERPINB7O75635 380 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 XRCC5P13010 732 aaKnown RBP7.84□□□□□ -1.16
SOX6-208ENST00000527619 CHRNB2P17787 502 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 VAMP1P23763 118 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 MZF1P28698 734 aaPredicted RBP7.84□□□□□ -1.16
SOX6-208ENST00000527619 GTF2H1P32780 548 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 SOX5P35711 763 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 ADCY8P40145 1251 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 ITGA8P53708 1063 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 RPL26P61254 145 aaKnown RBP7.84□□□□□ -1.16
SOX6-208ENST00000527619 SPIDRQ14159 915 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 ADRM1Q16186 407 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 CALCRLQ16602 461 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 PLEKHG4Q58EX7 1191 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 KRT79Q5XKE5 535 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 SIGIRRQ6IA17 410 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 GJB7Q6PEY0 223 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 C1orf228Q6PIY5 440 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 CCDC81Q6ZN84 652 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 RFX8Q6ZV50 586 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 KCNK18Q7Z418 384 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 LRRC6Q86X45 466 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 CCDC89Q8N998 374 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 RFWD2Q8NHY2 731 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 SCFD1Q8WVM8 642 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 GJD4Q96KN9 370 aaPredicted RBP7.84□□□□□ -1.16
SOX6-208ENST00000527619 TTC1Q99614 292 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 HGH1Q9BTY7 390 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 RAB34Q9BZG1 259 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 FHDC1Q9C0D6 1143 aaPredicted RBP7.84□□□□□ -1.16
SOX6-208ENST00000527619 BMP2KQ9NSY1 1161 aaPredicted RBP7.84□□□□□ -1.16
SOX6-208ENST00000527619 FAIMQ9NVQ4 179 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 IL20Q9NYY1 176 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 SENP1Q9P0U3 644 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 GCNT4Q9P109 453 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 MOSPD1Q9UJG1 213 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 DCTN4Q9UJW0 460 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 TRAF3IP3Q9Y228 551 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 PCDHA2Q9Y5H9 948 aa7.84□□□□□ -1.16
SOX6-208ENST00000527619 MEGF6O75095 1541 aa7.83□□□□□ -1.16
SOX6-208ENST00000527619 COL14A1Q05707 1796 aaKnown RBP7.83□□□□□ -1.16
SOX6-208ENST00000527619 GOLGA8CPA6NN73 597 aa7.83□□□□□ -1.16
SOX6-208ENST00000527619 NDC80O14777 642 aa7.83□□□□□ -1.16
SOX6-208ENST00000527619 ACSL4O60488 711 aa7.83□□□□□ -1.16
SOX6-208ENST00000527619 SORBS3O60504 671 aa7.83□□□□□ -1.16
SOX6-208ENST00000527619 TSPAN9O75954 239 aa7.83□□□□□ -1.16
SOX6-208ENST00000527619 ABHD2P08910 425 aa7.83□□□□□ -1.16
SOX6-208ENST00000527619 CPA3P15088 417 aa7.83□□□□□ -1.16
SOX6-208ENST00000527619 MAN1A1P33908 653 aa7.83□□□□□ -1.16
SOX6-208ENST00000527619 RPA3P35244 121 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms