RNA–Protein interactions for RNA: ENST00000527498.1

PUM1-219, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-219	ENST00000527498	BTBD7	Q9P203	1132 aa		4.22	□□□□□ -1.73
PUM1-219	ENST00000527498	DUSP13	Q9UII6	198 aa		4.22	□□□□□ -1.73
PUM1-219	ENST00000527498	SERPINB13	Q9UIV8	391 aa		4.22	□□□□□ -1.73
PUM1-219	ENST00000527498	ODF2L	Q9ULJ1	636 aa		4.22	□□□□□ -1.73
PUM1-219	ENST00000527498	SNX13	Q9Y5W8	968 aa		4.22	□□□□□ -1.73
PUM1-219	ENST00000527498	CFAP20	Q9Y6A4	193 aa	Known RBP	4.22	□□□□□ -1.73
PUM1-219	ENST00000527498	SI	P14410	1827 aa		4.22	□□□□□ -1.73
PUM1-219	ENST00000527498	PTPRZ1	P23471	2315 aa	Predicted RBP	4.22	□□□□□ -1.73
PUM1-219	ENST00000527498	TRIO	O75962	3097 aa		4.22	□□□□□ -1.73
PUM1-219	ENST00000527498	MYO5A	Q9Y4I1	1855 aa	Known RBP	4.22	□□□□□ -1.73
PUM1-219	ENST00000527498	SALL1	Q9NSC2	1324 aa		4.21	□□□□□ -1.73
PUM1-219	ENST00000527498	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	4.21	□□□□□ -1.73
PUM1-219	ENST00000527498	UBA6	A0AVT1	1052 aa	Predicted RBP	4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	LCHN	A4D1U4	455 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	LRRC10B	A6NIK2	292 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	C9orf172	C9J069	976 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	ADAMTS3	O15072	1205 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	DCX	O43602	365 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	BUB1B	O60566	1050 aa	Predicted RBP	4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	CDKL5	O76039	1030 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	TPPP	O94811	219 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	GDF11	O95390	407 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	ALDH2	P05091	517 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	CA3	P07451	260 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	ASNS	P08243	561 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	CLEC2L	P0C7M8	214 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	RARB	P10826	455 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	MYF5	P13349	255 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	IL9	P15248	144 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	PTPN1	P18031	435 aa	Known RBP	4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	FPR2	P25090	351 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	MSN	P26038	577 aa	Known RBP	4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	ATIC	P31939	592 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	CYP2C18	P33260	490 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	PIK3CB	P42338	1070 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	TEC	P42680	631 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	WAS	P42768	502 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	TRPC1	P48995	793 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	ACLY	P53396	1101 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	EPHA5	P54756	1037 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	CORO7	P57737	925 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	CCT2	P78371	535 aa	Known RBP	4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	IFT88	Q13099	833 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	BECN1	Q14457	450 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	TWISTNB	Q3B726	338 aa	Predicted RBP	4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	HSF5	Q4G112	596 aa	Predicted RBP	4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	CCDC38	Q502W7	563 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	PITRM1	Q5JRX3	1037 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	LVRN	Q6Q4G3	990 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	FAM180A	Q6UWF9	173 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	RSRC2	Q7L4I2	434 aa	Known RBP	4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	MAATS1	Q7Z4T9	603 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	DZIP1	Q86YF9	867 aa	Known RBP	4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	FAM20C	Q8IXL6	584 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	MYCT1	Q8N699	235 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	NEDD1	Q8NHV4	660 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	KLHDC4	Q8TBB5	520 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	SH3RF2	Q8TEC5	729 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	ARNTL2	Q8WYA1	636 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	TRIM11	Q96F44	468 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	APIP	Q96GX9	242 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	KAZALD1	Q96I82	304 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	HEXIM2	Q96MH2	286 aa	Known RBP	4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	PPM1M	Q96MI6	270 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	TUBGCP5	Q96RT8	1024 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	NOL10	Q9BSC4	688 aa	Known RBP	4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	MKNK2	Q9HBH9	465 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	PNPLA8	Q9NP80	782 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	GPRC5B	Q9NZH0	403 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	TNFRSF10D	Q9UBN6	386 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	NRBP1	Q9UHY1	535 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	ASB1	Q9Y576	335 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	SLC4A7	Q9Y6M7	1214 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	DCHS1	Q96JQ0	3298 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	TET1	Q8NFU7	2136 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	MYH8	P13535	1937 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	MROH7-TTC4	A0A0A0MT08	1334 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	UMODL1	Q5DID0	1318 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	MROH7	Q68CQ1	1323 aa		4.21	□□□□□ -1.74
PUM1-219	ENST00000527498	FAM186A	A6NE01	2351 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	TRIP12	Q14669	1992 aa	Predicted RBP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	ROBO3	Q96MS0	1386 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498		A0A087WV62	115 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498		A0A088AWK7	358 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	UQCRHL	A0A096LP55	91 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	GPR75-ASB3	A0A0A6YYF3	556 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	PRSS38	A1L453	326 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	PRAMEF25	A6NGN4	478 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	CCDC154	A6NI56	674 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	DHX15	O43143	795 aa	Known RBP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	HTRA2	O43464	458 aa	Predicted RBP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	ADAMTS4	O75173	837 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	ARHGEF15	O94989	841 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	ALX3	O95076	343 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	FUCA1	P04066	466 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	UQCRH	P07919	91 aa		4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	CELA2B	P08218	269 aa	Predicted RBP	4.2	□□□□□ -1.74
PUM1-219	ENST00000527498	CCDC159	P0C7I6	412 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms