RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 GPR88Q9GZN0 384 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 NIF3L1Q9GZT8 377 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 DNAJC25Q9H1X3 360 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 CRTAC1Q9NQ79 661 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 RWDD2AQ9UIY3 292 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 DOCK6Q96HP0 2047 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 MYO10Q9HD67 2058 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 TMEM221A6NGB7 291 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 PRR33A8MZF0 331 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 M0R296 226 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 CCDC192P0DO97 292 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 GJA1P17302 382 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 BDNFP23560 247 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 CCR2P41597 374 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 MAGEA11P43364 429 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 CCDC142Q17RM4 750 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 SDHAF4Q5VUM1 108 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 FAM171BQ6P995 826 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 FOXR2Q6PJQ5 311 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 PARM1Q6UWI2 310 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 SLC44A3Q8N4M1 653 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 SHKBP1Q8TBC3 707 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 PBXIP1Q96AQ6 731 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 PCED1BQ96HM7 432 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 PKMYT1Q99640 499 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 DUSP9Q99956 384 aaKnown RBP14.26□□□□□ -0.13
CAPN1-209ENST00000527469 KXD1Q9BQD3 176 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 SRRTQ9BXP5 876 aaKnown RBP14.26□□□□□ -0.13
CAPN1-209ENST00000527469 ELOVL4Q9GZR5 314 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 MFSD1Q9H3U5 465 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 DPEP3Q9H4B8 488 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 CYP3A43Q9HB55 503 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 RAB20Q9NX57 234 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 EHD2Q9NZN4 543 aa14.26□□□□□ -0.13
CAPN1-209ENST00000527469 UXTQ9UBK9 157 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-209ENST00000527469 ANHXE9PGG2 379 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 TRIM66O15016 1216 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 MBD3O95983 291 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 CD58P19256 250 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 ASPAP45381 313 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 GPR15P49685 360 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 NDST1P52848 882 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 ACOT1Q86TX2 421 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 UNC93AQ86WB7 457 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 TMC8Q8IU68 726 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 SUGP1Q8IWZ8 645 aaKnown RBP14.25□□□□□ -0.13
CAPN1-209ENST00000527469 TTC39CQ8N584 583 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 MRPS31Q92665 395 aaKnown RBP14.25□□□□□ -0.13
CAPN1-209ENST00000527469 FGF14Q92915 247 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 SMARCD2Q92925 531 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 LRFN3Q9BTN0 628 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 SMOC2Q9H3U7 446 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 ZFP14Q9HCL3 533 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 ZNF334Q9HCZ1 680 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-209ENST00000527469 DUSP12Q9UNI6 340 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 DOCK8Q8NF50 2099 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 TRIOO75962 3097 aa14.25□□□□□ -0.13
CAPN1-209ENST00000527469 SLC38A8A6NNN8 435 aa14.24□□□□□ -0.13
CAPN1-209ENST00000527469 DPYSL4O14531 572 aa14.24□□□□□ -0.13
CAPN1-209ENST00000527469 CFHP08603 1231 aa14.24□□□□□ -0.13
CAPN1-209ENST00000527469 SRFP11831 508 aa14.24□□□□□ -0.13
CAPN1-209ENST00000527469 ORC1Q13415 861 aa14.24□□□□□ -0.13
CAPN1-209ENST00000527469 CBWD6Q4V339 395 aa14.24□□□□□ -0.13
CAPN1-209ENST00000527469 CBWD3Q5JTY5 395 aa14.24□□□□□ -0.13
CAPN1-209ENST00000527469 FAM78AQ5JUQ0 283 aa14.24□□□□□ -0.13
CAPN1-209ENST00000527469 CBWD5Q5RIA9 395 aa14.24□□□□□ -0.13
CAPN1-209ENST00000527469 GPR158Q5T848 1215 aa14.24□□□□□ -0.13
CAPN1-209ENST00000527469 ZSCAN18Q8TBC5 510 aaPredicted RBP14.24□□□□□ -0.13
CAPN1-209ENST00000527469 SLC35C1Q96A29 364 aa14.24□□□□□ -0.13
CAPN1-209ENST00000527469 NT5C1AQ9BXI3 368 aa14.24□□□□□ -0.13
CAPN1-209ENST00000527469 BCO2Q9BYV7 579 aa14.24□□□□□ -0.13
CAPN1-209ENST00000527469 SDCBP2Q9H190 292 aa14.24□□□□□ -0.13
CAPN1-209ENST00000527469 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.24□□□□□ -0.13
CAPN1-209ENST00000527469 ZDBF2Q9HCK1 2354 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 F8VP50 259 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 STK25O00506 426 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 NARSO43776 548 aaKnown RBP14.23□□□□□ -0.13
CAPN1-209ENST00000527469 ECI2O75521 394 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 FMO5P49326 533 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 NLRP12P59046 1061 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 YWHAEP62258 255 aaKnown RBP14.23□□□□□ -0.13
CAPN1-209ENST00000527469 LRMPQ12912 555 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 GAREM2Q75VX8 874 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 YAF2Q8IY57 180 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 STKLD1Q8NE28 680 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 SEMA4DQ92854 862 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 E2F7Q96AV8 911 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 ELSPBP1Q96BH3 223 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 FAXDC2Q96IV6 333 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 SPATA17Q96L03 361 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 CEP295NLQ96MC4 621 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 ASB16Q96NS5 453 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 LRRC3Q9BY71 257 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 ZNF518BQ9C0D4 1074 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 APOBEC3GQ9HC16 384 aaKnown RBP14.23□□□□□ -0.13
CAPN1-209ENST00000527469 C11orf16Q9NQ32 467 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 ZMYM5Q9UJ78 669 aa14.23□□□□□ -0.13
CAPN1-209ENST00000527469 NOTCH4Q99466 2003 aa14.22□□□□□ -0.13
CAPN1-209ENST00000527469 TECTAO75443 2155 aa14.22□□□□□ -0.13
CAPN1-209ENST00000527469 CLDN5O00501 218 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms