RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 HEY2Q9UBP5 337 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 SLC24A2Q9UI40 661 aa13.14□□□□□ -0.31
CAPN1-208ENST00000527323 EME2A4GXA9 379 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-208ENST00000527323 WDR64B1ANS9 1081 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 C2CD2LO14523 706 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 GYG2O15488 501 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 TYROBPO43914 113 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 HAUS5O94927 633 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 ZWINTO95229 277 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 LMNAP02545 664 aaKnown RBP13.13□□□□□ -0.31
CAPN1-208ENST00000527323 FGFR1P11362 822 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 PHBP35232 272 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 LIG4P49917 911 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 NOMO3P69849 1222 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 MRPS35P82673 323 aaKnown RBP13.13□□□□□ -0.31
CAPN1-208ENST00000527323 SARNPP82979 210 aaKnown RBP13.13□□□□□ -0.31
CAPN1-208ENST00000527323 KLC1Q07866 573 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 TFDP1Q14186 410 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 EFTUD2Q15029 972 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■■■■ 29.3
CAPN1-208ENST00000527323 HIF1AQ16665 826 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 GJC2Q5T442 439 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-208ENST00000527323 CST9Q5W186 159 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 C3orf62Q6ZUJ4 267 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 PALM2Q8IXS6 379 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 RFWD2Q8NHY2 731 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 TCP10LQ8TDR4 215 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 ZBTB10Q96DT7 871 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 SLITRK1Q96PX8 696 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 C10orf88Q9H8K7 445 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 SYNPO2Q9UMS6 1093 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 UBIAD1Q9Y5Z9 338 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 DICER1Q9UPY3 1922 aaKnown RBP13.13□□□□□ -0.31
CAPN1-208ENST00000527323 IQCA1LA6NCM1 817 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 NVLO15381 856 aaKnown RBP13.13□□□□□ -0.31
CAPN1-208ENST00000527323 CCDC22O60826 627 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 HSD17B4P51659 736 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 SLC18A1P54219 525 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 THEMIS2Q5TEJ8 643 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 RBBP8NLQ8NC74 664 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-208ENST00000527323 FBXL18Q96ME1 805 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 TRIM55Q9BYV6 548 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 PORCNQ9H237 461 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 ANKEF1Q9NU02 776 aa13.13□□□□□ -0.31
CAPN1-208ENST00000527323 F8VP50 259 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 PLEKHG4Q58EX7 1191 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 PLEKHA7Q6IQ23 1121 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 TRIM72Q6ZMU5 477 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 SPOCD1Q6ZMY3 1216 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 ANO5Q75V66 913 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 MCF2L2Q86YR7 1114 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 RHPN2Q8IUC4 686 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 ENDOVQ8N8Q3 282 aaKnown RBP13.12□□□□□ -0.31
CAPN1-208ENST00000527323 TSC22D3Q99576 134 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 PPP1R12CQ9BZL4 782 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 MANSC1Q9H8J5 431 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 SAR1AQ9NR31 198 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 SAE1Q9UBE0 346 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-208ENST00000527323 AGTPBP1Q9UPW5 1226 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 KIF3CO14782 793 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 ARFIP2P53365 341 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 HUNKP57058 714 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 RCN1Q15293 331 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 BBS9Q3SYG4 887 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 DSTYKQ6XUX3 929 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 LRRC6Q86X45 466 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 DTX3LQ8TDB6 740 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 CADM1Q9BY67 442 aaKnown RBP13.12□□□□□ -0.31
CAPN1-208ENST00000527323 METTL5Q9NRN9 209 aaKnown RBP13.12□□□□□ -0.31
CAPN1-208ENST00000527323 ARL8BQ9NVJ2 186 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 DLGAP2Q9P1A6 1054 aa13.12□□□□□ -0.31
CAPN1-208ENST00000527323 CCNE2O96020 404 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 PSMC4P43686 418 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 JAK3P52333 1124 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 VCPP55072 806 aaKnown RBP13.11□□□□□ -0.31
CAPN1-208ENST00000527323 GAD2Q05329 585 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 CUL2Q13617 745 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 RNASEH2BQ5TBB1 312 aaKnown RBP13.11□□□□□ -0.31
CAPN1-208ENST00000527323 TDRD10Q5VZ19 366 aaKnown RBP13.11□□□□□ -0.31
CAPN1-208ENST00000527323 C4orf50Q6ZRC1 276 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 NIPA1Q7RTP0 329 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 STMN2Q93045 179 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 ZNF668Q96K58 619 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-208ENST00000527323 MCEEQ96PE7 176 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.11□□□□□ -0.31
CAPN1-208ENST00000527323 SLC17A7Q9P2U7 560 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 GABBR1Q9UBS5 961 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 SPDYE5A6NIY4 337 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 MT-ND3P03897 115 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 ARL4CP56559 192 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 GPX6P59796 221 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 SNX30Q5VWJ9 437 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 DNAJC24Q6P3W2 148 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 ERO1BQ86YB8 467 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 NSL1Q96IY1 281 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 VCPIP1Q96JH7 1222 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 PAFAH2Q99487 392 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 MIPEPQ99797 713 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 BTBD10Q9BSF8 475 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 TSSK1BQ9BXA7 367 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 RABGEF1Q9UJ41 708 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms