RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 BMS1Q14692 1282 aaKnown RBP11.46□□□□□ -0.57
NEDD8-205ENST00000527046 UVSSAQ2YD98 709 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 FKBP15Q5T1M5 1219 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 E4F1Q66K89 784 aaPredicted RBP11.46□□□□□ -0.57
NEDD8-205ENST00000527046 ARHGAP17Q68EM7 881 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 SMYD5Q6GMV2 418 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 ENOSF1Q7L5Y1 443 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 DCP1BQ8IZD4 617 aaKnown RBP11.46□□□□□ -0.57
NEDD8-205ENST00000527046 MICALL1Q8N3F8 863 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 RBBP8NLQ8NC74 664 aaPredicted RBP11.46□□□□□ -0.57
NEDD8-205ENST00000527046 MAFAQ8NHW3 353 aaPredicted RBP11.46□□□□□ -0.57
NEDD8-205ENST00000527046 PPM1EQ8WY54 764 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 DDX1Q92499 740 aaKnown RBP11.46□□□□□ -0.57
NEDD8-205ENST00000527046 CYFIP2Q96F07 1278 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 KCNK16Q96T55 309 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 SMOQ99835 787 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 PLEKHA4Q9H4M7 779 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 NLRC4Q9NPP4 1024 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 MAFFQ9ULX9 164 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 FSD2A1L4K1 749 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 F8VZ95 297 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 TULP2O00295 520 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 O00370 1275 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 CYP26A1O43174 497 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 C8AP07357 584 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 PAEPP09466 180 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 HMGA1P17096 107 aaKnown RBP11.45□□□□□ -0.58
NEDD8-205ENST00000527046 MAGEA11P43364 429 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 TSPY1Q01534 308 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 SMARCB1Q12824 385 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 TBX2Q13207 712 aaPredicted RBP11.45□□□□□ -0.58
NEDD8-205ENST00000527046 FILIP1LQ4L180 1135 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 FIGNQ5HY92 759 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 SDHAF4Q5VUM1 108 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 IRF2BP2Q7Z5L9 587 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 TTC30AQ86WT1 665 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 WDTC1Q8N5D0 677 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 STKLD1Q8NE28 680 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 CMASQ8NFW8 434 aaPredicted RBP11.45□□□□□ -0.58
NEDD8-205ENST00000527046 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.45□□□□□ -0.58
NEDD8-205ENST00000527046 SLC7A14Q8TBB6 771 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 SPPL2BQ8TCT7 592 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 SLC2A14Q8TDB8 520 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 C2orf15Q8WU43 125 aaKnown RBP11.45□□□□□ -0.58
NEDD8-205ENST00000527046 CASP10Q92851 521 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 TNIP3Q96KP6 325 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 HEXIM2Q96MH2 286 aaKnown RBP11.45□□□□□ -0.58
NEDD8-205ENST00000527046 SYT11Q9BT88 431 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 PRKD2Q9BZL6 878 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 CYP4F11Q9HBI6 524 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 CSNK1G1Q9HCP0 422 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 ABCB6Q9NP58 842 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 FAM49BQ9NUQ9 324 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 CLDND1Q9NY35 253 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 PCDHB5Q9Y5E4 795 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 INSL5Q9Y5Q6 135 aa11.45□□□□□ -0.58
NEDD8-205ENST00000527046 CCDC195A0A1B0GUA6 201 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 GRXCR2A6NFK2 248 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 TNFRSF10BO14763 440 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 NCK2O43639 380 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 MOSPD3O75425 235 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 TPM2P07951 284 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 VDRP11473 427 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 CHRNB2P17787 502 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 BRD2P25440 801 aaKnown RBP11.44□□□□□ -0.58
NEDD8-205ENST00000527046 TPM4P67936 248 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 MTMR3Q13615 1198 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 CNGA2Q16280 664 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 NFE2Q16621 373 aaPredicted RBP11.44□□□□□ -0.58
NEDD8-205ENST00000527046 DDR2Q16832 855 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 RTL10Q7L3V2 364 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 GPR149Q86SP6 731 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 FAM35AQ86V20 835 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 SLC47A2Q86VL8 602 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 VSTM4Q8IW00 320 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 TTC39CQ8N584 583 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 GPR152Q8TDT2 470 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 ZNF606Q8WXB4 792 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 SUSD6Q92537 303 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 FUBP3Q96I24 572 aaKnown RBP eCLIP11.44□□□□□ -0.58
NEDD8-205ENST00000527046 FAM81BQ96LP2 452 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 ANP32EQ9BTT0 268 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 APOL5Q9BWW9 433 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 EDEM3Q9BZQ6 932 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 UBE2ZQ9H832 354 aaPredicted RBP11.44□□□□□ -0.58
NEDD8-205ENST00000527046 ABI2Q9NYB9 513 aaPredicted RBP11.44□□□□□ -0.58
NEDD8-205ENST00000527046 IL37Q9NZH6 218 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 DNMT3BQ9UBC3 853 aaKnown RBP11.44□□□□□ -0.58
NEDD8-205ENST00000527046 KIAA1257Q9ULG3 409 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 YIPF1Q9Y548 306 aa11.44□□□□□ -0.58
NEDD8-205ENST00000527046 ITIH6Q6UXX5 1313 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 H3BQ06 376 aaPredicted RBP11.43□□□□□ -0.58
NEDD8-205ENST00000527046 GYPCP04921 128 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 POU2F2P09086 479 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 RFX1P22670 979 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 HOXA9P31269 272 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 SSTR3P32745 418 aaPredicted RBP11.43□□□□□ -0.58
NEDD8-205ENST00000527046 SOX5P35711 763 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 PGFP49763 221 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 ZNF75DP51815 510 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms