RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 PNPLA4P41247 253 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 TFAMQ00059 246 aaKnown RBP12.62□□□□□ -0.39
CAPN1-204ENST00000526468 SF3A2Q15428 464 aaKnown RBP12.62□□□□□ -0.39
CAPN1-204ENST00000526468 SDHAF4Q5VUM1 108 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 FSTL4Q6MZW2 842 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 DYMQ7RTS9 669 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 BRAPQ7Z569 592 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 LRRTM3Q86VH5 581 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 GAB3Q8WWW8 586 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 USP13Q92995 863 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-204ENST00000526468 SAAL1Q96ER3 474 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 HHIPQ96QV1 700 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 PI4K2AQ9BTU6 479 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 MRPL44Q9H9J2 332 aaKnown RBP12.62□□□□□ -0.39
CAPN1-204ENST00000526468 TRPC7Q9HCX4 862 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 GKN1Q9NS71 199 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 CHD6Q8TD26 2715 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 CACNA1EQ15878 2313 aa12.62□□□□□ -0.39
CAPN1-204ENST00000526468 VPS37CA5D8V6 355 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-204ENST00000526468 TADA3O75528 432 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 EPN2O95208 641 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 EGFP01133 1207 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 ITGB3P05106 788 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 CKMP06732 381 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 ACAT1P24752 427 aaKnown RBP12.61□□□□□ -0.39
CAPN1-204ENST00000526468 HOXA6P31267 233 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 FAM193AP78312 1265 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 RUNX3Q13761 415 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 SF3A1Q15459 793 aaKnown RBP12.61□□□□□ -0.39
CAPN1-204ENST00000526468 NFE2Q16621 373 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-204ENST00000526468 ST3GAL2Q16842 350 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 TMEM196Q5HYL7 178 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 TXNDC8Q6A555 127 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 LRSAM1Q6UWE0 723 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 CACNA2D4Q7Z3S7 1137 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 TMEM150AQ86TG1 271 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 NT5DC4Q86YG4 428 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 BRSK2Q8IWQ3 736 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 PDCL2Q8N4E4 241 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 CPA6Q8N4T0 437 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 FAM84AQ96KN4 292 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 FAM83CQ9BQN1 747 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 FAM213AQ9BRX8 229 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 ARRDC1-AS1Q9H2J1 176 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 ST6GALNAC4Q9H4F1 302 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 TDP1Q9NUW8 608 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 TMLHEQ9NVH6 421 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 RBAKQ9NYW8 714 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-204ENST00000526468 TBC1D7Q9P0N9 293 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 L1RE1Q9UN81 338 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 EXOC7Q9UPT5 735 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 STYXL1Q9Y6J8 313 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 LAMA1P25391 3075 aa12.61□□□□□ -0.39
CAPN1-204ENST00000526468 OTOL1A6NHN0 477 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-204ENST00000526468 AXIN1O15169 862 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 HUS1O60921 280 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 ATG13O75143 517 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 GCNT3O95395 438 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 KRT19P08727 400 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 CSH1P0DML2 217 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 CSH2P0DML3 217 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 HMGA1P17096 107 aaKnown RBP12.6□□□□□ -0.39
CAPN1-204ENST00000526468 TXLNAP40222 546 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 IFNAR2P48551 515 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 WNT7BP56706 349 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 AMPD2Q01433 879 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 MYL7Q01449 175 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 USP4Q13107 963 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 MTF1Q14872 753 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 PDGFRLQ15198 375 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 CCDC142Q17RM4 750 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 INTS6LQ5JSJ4 861 aaKnown RBP12.6□□□□□ -0.39
CAPN1-204ENST00000526468 LARP1BQ659C4 914 aaKnown RBP12.6□□□□□ -0.39
CAPN1-204ENST00000526468 NAIF1Q69YI7 327 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-204ENST00000526468 CRELD2Q6UXH1 353 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-204ENST00000526468 KBTBD6Q86V97 674 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 CREBRFQ8IUR6 639 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 RIN3Q8TB24 985 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 LEO1Q8WVC0 666 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-204ENST00000526468 DDX1Q92499 740 aaKnown RBP12.6□□□□□ -0.39
CAPN1-204ENST00000526468 CHFRQ96EP1 664 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 DDX43Q9NXZ2 648 aaKnown RBP12.6□□□□□ -0.39
CAPN1-204ENST00000526468 UXTQ9UBK9 157 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-204ENST00000526468 STK17AQ9UEE5 414 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 AGAP1Q9UPQ3 857 aa12.6□□□□□ -0.39
CAPN1-204ENST00000526468 PCNX2A6NKB5 2137 aa12.59□□□□□ -0.39
CAPN1-204ENST00000526468 UQCRHLA0A096LP55 91 aa12.59□□□□□ -0.39
CAPN1-204ENST00000526468 TRAV19A0A0A6YYK7 116 aa12.59□□□□□ -0.39
CAPN1-204ENST00000526468 TRDMT1O14717 391 aaKnown RBP12.59□□□□□ -0.39
CAPN1-204ENST00000526468 PPP1R37O75864 691 aa12.59□□□□□ -0.39
CAPN1-204ENST00000526468 F11P03951 625 aa12.59□□□□□ -0.39
CAPN1-204ENST00000526468 UQCRHP07919 91 aa12.59□□□□□ -0.39
CAPN1-204ENST00000526468 TMEM191BP0C7N4 346 aa12.59□□□□□ -0.39
CAPN1-204ENST00000526468 GAP43P17677 238 aa12.59□□□□□ -0.39
CAPN1-204ENST00000526468 CYP2F1P24903 491 aa12.59□□□□□ -0.39
CAPN1-204ENST00000526468 ADSSP30520 456 aa12.59□□□□□ -0.39
CAPN1-204ENST00000526468 MPLP40238 635 aa12.59□□□□□ -0.39
CAPN1-204ENST00000526468 RPL10AP62906 217 aaKnown RBP12.59□□□□□ -0.39
CAPN1-204ENST00000526468 PSMD2Q13200 908 aa12.59□□□□□ -0.39
CAPN1-204ENST00000526468 ZNF268Q14587 947 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms