RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 HPSEQ9Y251 543 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 FAM186AA6NE01 2351 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 PVALEFA0A1B0GWK0 134 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 OTOL1A6NHN0 477 aaPredicted RBP12.91□□□□□ -0.34
SSBP3-210ENST00000525990 DPYSL4O14531 572 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 CHRNB1P11230 501 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 RPS9P46781 194 aaKnown RBP12.91□□□□□ -0.34
SSBP3-210ENST00000525990 KPNA1P52294 538 aaPredicted RBP12.91□□□□□ -0.34
SSBP3-210ENST00000525990 CACNA2D1P54289 1103 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 MYL6P60660 151 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 SMARCB1Q12824 385 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 SURF1Q15526 300 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 NFE2Q16621 373 aaPredicted RBP12.91□□□□□ -0.34
SSBP3-210ENST00000525990 TRIM68Q6AZZ1 485 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 FAM171BQ6P995 826 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 Q6ZS52 159 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 HS2ST1Q7LGA3 356 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 SPATA2LQ8IUW3 424 aaPredicted RBP12.91□□□□□ -0.34
SSBP3-210ENST00000525990 BPIFB1Q8TDL5 484 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 CSGALNACT1Q8TDX6 532 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 USP13Q92995 863 aaPredicted RBP12.91□□□□□ -0.34
SSBP3-210ENST00000525990 CHFRQ96EP1 664 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 SPATA32Q96LK8 384 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 GCNAQ96QF7 691 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 MMS19Q96T76 1030 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 GOLPH3LQ9H4A5 285 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 DPEP3Q9H4B8 488 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 LMAN1LQ9HAT1 526 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 GDPD2Q9HCC8 539 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 KIAA1586Q9HCI6 787 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 C2orf42Q9NWW7 574 aa12.91□□□□□ -0.34
SSBP3-210ENST00000525990 LRRIQ3A6PVS8 624 aaPredicted RBP12.9□□□□□ -0.34
SSBP3-210ENST00000525990 SPECC1L-ADORA2AF8WAN1 911 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 MAN2B1O00754 1011 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 NOL4O94818 638 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 FGF19O95750 216 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 CSH1P0DML2 217 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 CSH2P0DML3 217 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
SSBP3-210ENST00000525990 WARSP23381 471 aaKnown RBP12.9□□□□□ -0.34
SSBP3-210ENST00000525990 BDNFP23560 247 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 CMA1P23946 247 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 PCSK1P29120 753 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 CTHP32929 405 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 RAP1GAPP47736 663 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 LHX1P48742 406 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 NDUFA8P51970 172 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 USP46P62068 366 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 DLG4P78352 724 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 PON2Q15165 354 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 CFAP221Q4G0U5 840 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 TDRD10Q5VZ19 366 aaKnown RBP12.9□□□□□ -0.34
SSBP3-210ENST00000525990 NAIF1Q69YI7 327 aaPredicted RBP12.9□□□□□ -0.34
SSBP3-210ENST00000525990 C12orf56Q8IXR9 622 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 DCLK2Q8N568 766 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 SUMF1Q8NBK3 374 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 TTC16Q8NEE8 873 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 E2F7Q96AV8 911 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 PCED1BQ96HM7 432 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 FNBP1Q96RU3 617 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 CYP2S1Q96SQ9 504 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 NELL2Q99435 816 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 XYLT2Q9H1B5 865 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 CHRDQ9H2X0 955 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 KCTD10Q9H3F6 313 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 TRPC7Q9HCX4 862 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 ABCB6Q9NP58 842 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 HPS4Q9NQG7 708 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 PRMT8Q9NR22 394 aaPredicted RBP12.9□□□□□ -0.34
SSBP3-210ENST00000525990 EXOC1Q9NV70 894 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 MRPS17Q9Y2R5 130 aaKnown RBP12.9□□□□□ -0.34
SSBP3-210ENST00000525990 MYOFQ9NZM1 2061 aa12.9□□□□□ -0.34
SSBP3-210ENST00000525990 RIF1Q5UIP0 2472 aaKnown RBP12.89□□□□□ -0.35
SSBP3-210ENST00000525990 C2orf78A6NCI8 922 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 CLDN5O00501 218 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 EXOC3O60645 756 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 VNN1O95497 513 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 LMNAP02545 664 aaKnown RBP12.89□□□□□ -0.35
SSBP3-210ENST00000525990 RPN1P04843 607 aaKnown RBP12.89□□□□□ -0.35
SSBP3-210ENST00000525990 TDGF1P13385 188 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 ARSAP15289 507 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 CDH8P55286 799 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 KRT85P78386 507 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 SATB1Q01826 763 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 CYP27A1Q02318 531 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 DMWDQ09019 674 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 WDR72Q3MJ13 1102 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 ARHGAP29Q52LW3 1261 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 MDH1BQ5I0G3 518 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 SCARA5Q6ZMJ2 495 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 DPH6Q7L8W6 267 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 SPATA18Q8TC71 538 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 SDCBP2Q9H190 292 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 EBF3Q9H4W6 596 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 SMYD3Q9H7B4 428 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 GKN1Q9NS71 199 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 OBP2AQ9NY56 170 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 NXF1Q9UBU9 619 aaKnown RBP12.89□□□□□ -0.35
SSBP3-210ENST00000525990 FBXO4Q9UKT5 387 aa12.89□□□□□ -0.35
SSBP3-210ENST00000525990 CDH9Q9ULB4 789 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms