RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 EML3Q32P44 896 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 C2orf27AQ580R0 203 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 SDHAF4Q5VUM1 108 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 ARMCX6Q7L4S7 300 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 MON1AQ86VX9 555 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 TTC30AQ86WT1 665 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 FAM184AQ8NB25 1140 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 FBXO18Q8NFZ0 1043 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 C2orf15Q8WU43 125 aaKnown RBP13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 OSCP1Q8WVF1 389 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 ATP2A3Q93084 1043 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 C8orf76Q96K31 380 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 CNOT6LQ96LI5 555 aaKnown RBP13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 PYM1Q9BRP8 204 aaKnown RBP13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 MMTAG2Q9BU76 263 aaKnown RBP13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 TIPINQ9BVW5 301 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 SLC32A1Q9H598 525 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 TMLHEQ9NVH6 421 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 EVLQ9UI08 416 aaPredicted RBP13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 DSEQ9UL01 958 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 SMC3Q9UQE7 1217 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 KIF3AQ9Y496 699 aa13.48□□□□□ -0.25
CCDC90B-205ENST00000525916 ATXN2Q99700 1313 aaKnown RBP13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 ANO9A1A5B4 782 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 PIRO00625 290 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 CYB561D2O14569 222 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 OGTO15294 1046 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 ADRB2P07550 413 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 ENGP17813 658 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 LIG4P49917 911 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 SIM1P81133 766 aaPredicted RBP13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 FAM160A1Q05DH4 1040 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 ZRSR1Q15695 479 aaKnown RBP13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 KRT79Q5XKE5 535 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 WSCD1Q658N2 575 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 METTL23Q86XA0 190 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 THEM5Q8N1Q8 247 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 CCDC33Q8N5R6 958 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 USP33Q8TEY7 942 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 RLN3Q8WXF3 142 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 SLC22A12Q96S37 553 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 PI4K2AQ9BTU6 479 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 NUSAP1Q9BXS6 441 aaKnown RBP13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 RAB34Q9BZG1 259 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 FOXP1Q9H334 677 aaPredicted RBP13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 TRPC7Q9HCX4 862 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 CIZ1Q9ULV3 898 aaPredicted RBP13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 STK24Q9Y6E0 443 aa13.47□□□□□ -0.25
CCDC90B-205ENST00000525916 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 NPHP3-ACAD11A0A0J9YXS1 232 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 K7EQS6 105 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 HNRNPDLO14979 420 aaKnown RBP13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 CSH1P0DML2 217 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 CSH2P0DML3 217 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 HNRNPLP14866 589 aaKnown RBP eCLIP13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 NCKAP1LP55160 1127 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 SMARCB1Q12824 385 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 LMAN2Q12907 356 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 TMEM132DQ14C87 1099 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 IL17AQ16552 155 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 KYAT1Q16773 422 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 EFCAB13Q8IY85 973 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 TMEFF1Q8IYR6 380 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 FRMD1Q8N878 549 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 TSPAN18Q96SJ8 248 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 CYP2S1Q96SQ9 504 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 FSCN3Q9NQT6 498 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 TMEM74BQ9NUR3 256 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 MMP17Q9ULZ9 603 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 PCDHB5Q9Y5E4 795 aa13.46□□□□□ -0.25
CCDC90B-205ENST00000525916 LAMA5O15230 3695 aa13.46□□□□□ -0.26
CCDC90B-205ENST00000525916 ITPR1Q14643 2758 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 PRPF40AO75400 957 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 CKMP06732 381 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 PAX3P23760 479 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 OPRD1P41143 372 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 P2RY2P41231 377 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 PTGER3P43115 390 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 TRAPPC10P48553 1259 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 TAF6P49848 677 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 FAM193AP78312 1265 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 GNL2Q13823 731 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 CRY1Q16526 586 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 ZC2HC1CQ53FD0 456 aaPredicted RBP13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 C19orf48Q6RUI8 117 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 TMEM92Q6UXU6 159 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 LPCAT2Q7L5N7 544 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 PIP4P1Q86T03 277 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 PROSER1Q86XN7 944 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 DCP1BQ8IZD4 617 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 CHCHD4Q8N4Q1 142 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 FNBP1Q96RU3 617 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 PLIN2Q99541 437 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 MSTO1Q9BUK6 570 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 LINC00597Q9H2U6 94 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 TMEM206Q9H813 350 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 CPSF3Q9UKF6 684 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 NOL7Q9UMY1 257 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 PCDHB6Q9Y5E3 794 aa13.45□□□□□ -0.26
CCDC90B-205ENST00000525916 TRAV19A0A0A6YYK7 116 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms