RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 DNAJC7Q99615 494 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 CARD9Q9H257 536 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 MROH8Q9H579 483 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 ECT2Q9H8V3 914 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 SMPD4Q9NXE4 827 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 RPS6KL1Q9Y6S9 549 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 KRT4P19013 534 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 OTUD4Q01804 1114 aaKnown RBP8.67□□□□□ -1.02
CHD7-203ENST00000525508 EFEMP1Q12805 493 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 CBWD6Q4V339 395 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 CBWD3Q5JTY5 395 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 CBWD5Q5RIA9 395 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 CCDC60Q8IWA6 550 aaPredicted RBP8.67□□□□□ -1.02
CHD7-203ENST00000525508 SCUBE3Q8IX30 993 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 ARMC2Q8NEN0 867 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 ASAP3Q8TDY4 903 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 HDAC7Q8WUI4 952 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 RXFP2Q8WXD0 754 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 CELF6Q96J87 481 aaKnown RBP8.67□□□□□ -1.02
CHD7-203ENST00000525508 ARHGEF38Q9NXL2 777 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 PSD3Q9NYI0 1048 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 PCDHB7Q9Y5E2 793 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 ORC6Q9Y5N6 252 aa8.67□□□□□ -1.02
CHD7-203ENST00000525508 ATP9AO75110 1047 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 LUC7L3O95232 432 aaKnown RBP8.66□□□□□ -1.02
CHD7-203ENST00000525508 PTPRAP18433 802 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 CHRM3P20309 590 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 HSD17B3P37058 310 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 ALDH1A3P47895 512 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 PDAP1Q13442 181 aaKnown RBP8.66□□□□□ -1.02
CHD7-203ENST00000525508 RBBP7Q16576 425 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 NFIL3Q16649 462 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 EFHC1Q5JVL4 640 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 SPATA21Q7Z572 469 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 SLC35C1Q96A29 364 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 ERP27Q96DN0 273 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 TMA16Q96EY4 203 aaKnown RBP8.66□□□□□ -1.02
CHD7-203ENST00000525508 APOL5Q9BWW9 433 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 IDI2Q9BXS1 227 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 IL1RL2Q9HB29 575 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.66□□□□□ -1.02
CHD7-203ENST00000525508 FAF1Q9UNN5 650 aaPredicted RBP8.66□□□□□ -1.02
CHD7-203ENST00000525508 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.66□□□□□ -1.02
CHD7-203ENST00000525508 SH3BP1Q9Y3L3 701 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 ADGRA2Q96PE1 1338 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 DISP2A7MBM2 1401 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 FAM47DPA6NHR8 397 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 TRIM49D1C9J1S8 452 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 ANKRD63C9JTQ0 380 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 ZNF263O14978 683 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 THP07101 528 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 GLRBP48167 497 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 DLG4P78352 724 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 FSCBQ5H9T9 825 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 LVRNQ6Q4G3 990 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.66□□□□□ -1.02
CHD7-203ENST00000525508 CACUL1Q86Y37 369 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 RDM1Q8NG50 284 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 ACTL9Q8TC94 416 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 ZNF606Q8WXB4 792 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 TSSK1BQ9BXA7 367 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 CCDC90BQ9GZT6 254 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 CXorf56Q9H5V9 222 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 LSM7Q9UK45 103 aaKnown RBP8.66□□□□□ -1.02
CHD7-203ENST00000525508 AURKCQ9UQB9 309 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 PREX1Q8TCU6 1659 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 P4HA2O15460 535 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 MT-CO1P00395 513 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 JCHAINP01591 159 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 BMP6P22004 513 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 HOXA10P31260 410 aaPredicted RBP8.66□□□□□ -1.02
CHD7-203ENST00000525508 AVPR1AP37288 418 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 PTPN11Q06124 597 aaPredicted RBP8.66□□□□□ -1.02
CHD7-203ENST00000525508 MAPK7Q13164 816 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 STX3Q13277 289 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 EFTUD2Q15029 972 aaKnown RBP eCLIP8.66□□□□□ -1.02
CHD7-203ENST00000525508 Q4G0T1 1027 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 ANKRD20A4Q4UJ75 823 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 ANKRD20A8PQ5CZ79 823 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 ANKRD20A2Q5SQ80 823 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 ANKRD20A1Q5TYW2 823 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 FBXW10Q5XX13 1052 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 MOXD1Q6UVY6 613 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 CXCL17Q6UXB2 119 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 SLC51AQ86UW1 340 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 TRIML2Q8N7C3 387 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 PPHLN1Q8NEY8 458 aaKnown RBP8.66□□□□□ -1.02
CHD7-203ENST00000525508 GPR63Q9BZJ6 419 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 ATXN3LQ9H3M9 355 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 COG4Q9H9E3 785 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.66□□□□□ -1.02
CHD7-203ENST00000525508 ATP11BQ9Y2G3 1177 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 V9GYQ6 96 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 COL3A1P02461 1466 aaPredicted RBP8.66□□□□□ -1.02
CHD7-203ENST00000525508 ALDH1A1P00352 501 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 GLI1P08151 1106 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 LSP1P33241 339 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 NDST1P52848 882 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 PDK1Q15118 436 aa8.66□□□□□ -1.02
CHD7-203ENST00000525508 BOLA3Q53S33 107 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms