RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 SOX7Q9BT81 388 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 MS4A7Q9GZW8 240 aaPredicted RBP5.98□□□□□ -1.45
USP47-204ENST00000525078 RXFP1Q9HBX9 757 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 XAB2Q9HCS7 855 aaKnown RBP5.98□□□□□ -1.45
USP47-204ENST00000525078 G6PC2Q9NQR9 355 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 POLR3BQ9NW08 1133 aaPredicted RBP5.98□□□□□ -1.45
USP47-204ENST00000525078 NUDT5Q9UKK9 219 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 ACSL6Q9UKU0 697 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 CA14Q9ULX7 337 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 SMG5Q9UPR3 1016 aaKnown RBP5.98□□□□□ -1.45
USP47-204ENST00000525078 DTNAQ9Y4J8 743 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 PASKQ96RG2 1323 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 A0A087WWL8 130 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 C17orf113A0A1B0GUU1 675 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 VWA3AA6NCI4 1184 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 H0Y858 1186 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 PPP6R2O75170 966 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 HMMRO75330 724 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 CLEC3BP05452 202 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 ENO2P09104 434 aaPredicted RBP5.97□□□□□ -1.45
USP47-204ENST00000525078 CKBP12277 381 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 STMN1P16949 149 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 PRKCAP17252 672 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 KLRK1P26718 216 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 ATP5DP30049 168 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 DPP6P42658 865 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 KIR2DL1P43626 348 aaPredicted RBP5.97□□□□□ -1.45
USP47-204ENST00000525078 KIR2DL2P43627 348 aaPredicted RBP5.97□□□□□ -1.45
USP47-204ENST00000525078 MCM2P49736 904 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 RARSP54136 660 aaKnown RBP5.97□□□□□ -1.45
USP47-204ENST00000525078 MLLT6P55198 1093 aaPredicted RBP5.97□□□□□ -1.45
USP47-204ENST00000525078 OXCT1P55809 520 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 ATP8B2P98198 1209 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 DCTN2Q13561 401 aaKnown RBP5.97□□□□□ -1.45
USP47-204ENST00000525078 GRIK4Q16099 956 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 NFIL3Q16649 462 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 ODF2Q5BJF6 829 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 PRAMEF14Q5SWL7 426 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 MFSD5Q6N075 450 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 MRNIPQ6NTE8 343 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 PLBD1Q6P4A8 553 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 GALNT18Q6P9A2 607 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 RAPH1Q70E73 1250 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 IKBIPQ70UQ0 350 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 H1FNTQ75WM6 255 aaPredicted RBP5.97□□□□□ -1.45
USP47-204ENST00000525078 RTL10Q7L3V2 364 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 ZAR1Q86SH2 424 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 IRF2BP1Q8IU81 584 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 ERC1Q8IUD2 1116 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 GRAMD1AQ96CP6 724 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 SPAG5Q96R06 1193 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 BTBD2Q9BX70 525 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 RABEP2Q9H5N1 569 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 VEZTQ9HBM0 779 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 SPON1Q9HCB6 807 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 ATP13A1Q9HD20 1204 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 ERVK-5Q9HDB9 667 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 TLR9Q9NR96 1032 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 SEMA3GQ9NS98 782 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 SPATA6Q9NWH7 488 aaPredicted RBP5.97□□□□□ -1.45
USP47-204ENST00000525078 NDUFAF4Q9P032 175 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 CFAP97Q9P2B7 532 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 TBC1D14Q9P2M4 693 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 SEL1LQ9UBV2 794 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 KCND3Q9UK17 655 aa5.97□□□□□ -1.45
USP47-204ENST00000525078 KRTAP9-6A0A140TA67 174 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 FAM170BA6NMN3 283 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 RTCAO00442 366 aaKnown RBP5.96□□□□□ -1.46
USP47-204ENST00000525078 TSPAN4O14817 238 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 PCDH17O14917 1159 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 NTSR2O95665 410 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 CEACAM5P06731 702 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 GLI4P10075 376 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 LAMP2P13473 410 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 SCP2P22307 547 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 PSMA4P25789 261 aaKnown RBP5.96□□□□□ -1.46
USP47-204ENST00000525078 PCSK1P29120 753 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 KIF5BP33176 963 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 PTPN7P35236 360 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 HARS2P49590 506 aaKnown RBP5.96□□□□□ -1.46
USP47-204ENST00000525078 CTCFP49711 727 aaPredicted RBP5.96□□□□□ -1.46
USP47-204ENST00000525078 CPT1AP50416 773 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 RPS3AP61247 264 aaKnown RBP5.96□□□□□ -1.46
USP47-204ENST00000525078 SNRPNP63162 240 aaKnown RBP5.96□□□□□ -1.46
USP47-204ENST00000525078 UBXN1Q04323 297 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 EPS8Q12929 822 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 MTM1Q13496 603 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 C19orf54Q5BKX5 351 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 CCDC158Q5M9N0 1113 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 NAA35Q5VZE5 725 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 PLAG1Q6DJT9 500 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 ISM2Q6H9L7 571 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 SDCCAG8Q86SQ7 713 aaPredicted RBP5.96□□□□□ -1.46
USP47-204ENST00000525078 CEP97Q8IW35 865 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 ARMC10Q8N2F6 343 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 ARL6IP6Q8N6S5 226 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 RUFY2Q8WXA3 655 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 GATA6Q92908 595 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 SECISBP2LQ93073 1101 aaKnown RBP5.96□□□□□ -1.46
USP47-204ENST00000525078 PEX11GQ96HA9 241 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms