RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 STAG3L1P0CL83 205 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 AKR1B1P15121 316 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 DNM2P50570 870 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 ALDH5A1P51649 535 aaPredicted RBP8.07□□□□□ -1.12
NEDD8-203ENST00000524927 STRN3Q13033 797 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 MTAPQ13126 283 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 SLC14A2Q15849 920 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 PAN2Q504Q3 1202 aaKnown RBP8.07□□□□□ -1.12
NEDD8-203ENST00000524927 PKN3Q6P5Z2 889 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 CEP128Q6ZU80 1094 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 CEP68Q76N32 757 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 DDX42Q86XP3 938 aaKnown RBP eCLIP8.07□□□□□ -1.12
NEDD8-203ENST00000524927 MRPL43Q8N983 215 aaKnown RBP8.07□□□□□ -1.12
NEDD8-203ENST00000524927 IGSF22Q8N9C0 903 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 PCDH19Q8TAB3 1148 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 ARRDC1-AS1Q9H2J1 176 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 IPPKQ9H8X2 491 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 PRDM7Q9NQW5 492 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 GULP1Q9UBP9 304 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 COQ6Q9Y2Z9 468 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 RELNP78509 3460 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 COL6A6A6NMZ7 2263 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 URB1O60287 2271 aaKnown RBP8.06□□□□□ -1.12
NEDD8-203ENST00000524927 BIN1O00499 593 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 GSTA4O15217 222 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 ZGLP1P0C6A0 271 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 CDK11BP21127 795 aaKnown RBP8.06□□□□□ -1.12
NEDD8-203ENST00000524927 GRK2P25098 689 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 GRK3P35626 688 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 KIR2DL1P43626 348 aaPredicted RBP8.06□□□□□ -1.12
NEDD8-203ENST00000524927 KIR2DL2P43627 348 aaPredicted RBP8.06□□□□□ -1.12
NEDD8-203ENST00000524927 HK2P52789 917 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 MLF2Q15773 248 aaPredicted RBP8.06□□□□□ -1.12
NEDD8-203ENST00000524927 ABHD17CQ6PCB6 329 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 TMC5Q6UXY8 1006 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 STRA8Q7Z7C7 330 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 LINC01599Q8WXQ3 324 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 FBXW5Q969U6 566 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 TMEM169Q96HH4 297 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 JMJD8Q96S16 334 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 NUP88Q99567 741 aaPredicted RBP8.06□□□□□ -1.12
NEDD8-203ENST00000524927 KCNJ15Q99712 375 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 G6PC3Q9BUM1 346 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 SFXN1Q9H9B4 322 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 MARCH2Q9P0N8 246 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 PPARGC1AQ9UBK2 798 aaKnown RBP8.06□□□□□ -1.12
NEDD8-203ENST00000524927 TMEM59LQ9UK28 342 aa8.06□□□□□ -1.12
NEDD8-203ENST00000524927 C4orf47A7E2U8 309 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 M0R2C6 588 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 N4BP1O75113 896 aaKnown RBP8.05□□□□□ -1.12
NEDD8-203ENST00000524927 EPN2O95208 641 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 GH1P01241 217 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 RDXP35241 583 aaKnown RBP8.05□□□□□ -1.12
NEDD8-203ENST00000524927 CFHR1Q03591 330 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 ARHGAP1Q07960 439 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 SMC1AQ14683 1233 aaKnown RBP8.05□□□□□ -1.12
NEDD8-203ENST00000524927 SART3Q15020 963 aaKnown RBP8.05□□□□□ -1.12
NEDD8-203ENST00000524927 COLEC12Q5KU26 742 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 SPOUT1Q5T280 376 aaKnown RBP8.05□□□□□ -1.12
NEDD8-203ENST00000524927 C15orf39Q6ZRI6 1047 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 SPPL2CQ8IUH8 684 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 ANKS4BQ8N8V4 417 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 COLGALT1Q8NBJ5 622 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 USP33Q8TEY7 942 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 STAMQ92783 540 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 ATP6V0A1Q93050 837 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 TRMT2BQ96GJ1 504 aaKnown RBP8.05□□□□□ -1.12
NEDD8-203ENST00000524927 MPHOSPH6Q99547 160 aaKnown RBP8.05□□□□□ -1.12
NEDD8-203ENST00000524927 VPS45Q9NRW7 570 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 CATSPERZQ9NTU4 200 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 EBF1Q9UH73 591 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 FBXL7Q9UJT9 491 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 FEM1BQ9UK73 627 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 PCDHGA5Q9Y5G8 931 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 LAMA1P25391 3075 aa8.05□□□□□ -1.12
NEDD8-203ENST00000524927 NRCAMQ92823 1304 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 CCDC66A2RUB6 948 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 C17orf102A2RUQ5 167 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 ANHXE9PGG2 379 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 RAB11FIP3O75154 756 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 FUCA1P04066 466 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 UQCRFS1P1P0C7P4 283 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 HOXC8P31273 242 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 SCNN1BP51168 640 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 CCR3P51677 355 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 SEPT7Q16181 437 aaKnown RBP8.04□□□□□ -1.12
NEDD8-203ENST00000524927 KRTAP21-3Q3LHN1 58 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 SLC44A4Q53GD3 710 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 CCDC62Q6P9F0 684 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 SLCO6A1Q86UG4 719 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 CABP7Q86V35 215 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 TEX2Q8IWB9 1127 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 AFAP1L2Q8N4X5 818 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 OXR1Q8N573 874 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 OR2W6PQ8NHA6 318 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 PI4K2BQ8TCG2 481 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 GLG1Q92896 1179 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 USP7Q93009 1102 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 CCDC120Q96HB5 630 aa8.04□□□□□ -1.12
NEDD8-203ENST00000524927 EDEM2Q9BV94 578 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms