RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 TBC1D4O60343 1298 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 LSM8O95777 96 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 CFHP08603 1231 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 FAM228BP0C875 321 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 CTSAP10619 480 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 RPL17P18621 184 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 GPM6BQ13491 265 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 SPA17Q15506 151 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 PTPN14Q15678 1187 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 NFE2Q16621 373 aaPredicted RBP16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 CLEC16AQ2KHT3 1053 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 HS1BP3Q53T59 392 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 DENND1BQ6P3S1 775 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 FAM35AQ86V20 835 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 PALB2Q86YC2 1186 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 SPATA2LQ8IUW3 424 aaPredicted RBP16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 GPR65Q8IYL9 337 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 FUKQ8N0W3 1084 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 OLIG1Q8TAK6 271 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 SPPL3Q8TCT6 385 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 POF1BQ8WVV4 589 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 AUTS2Q8WXX7 1259 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 TIFAQ96CG3 184 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 PCDHB18PQ96TA0 734 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 HNRNPABQ99729 332 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 TCF25Q9BQ70 676 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 B3GNT5Q9BYG0 378 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 CERS4Q9HA82 394 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 TLR9Q9NR96 1032 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 TMLHEQ9NVH6 421 aa16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 EPN1Q9Y6I3 576 aaPredicted RBP16.79■□□□□ 0.28
TSPAN4-213ENST00000524895 PDE4DIPQ5VU43 2346 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 EIF3CLB5ME19 914 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 CLDN5O00501 218 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 CSPG5O95196 566 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 FAM200BP0CF97 657 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 CDR1P51861 262 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 BCAT1P54687 386 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 SLC8A3P57103 927 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 SMC1AQ14683 1233 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 CCDC122Q5T0U0 273 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 NAA35Q5VZE5 725 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 SLC8B1Q6J4K2 584 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 RSPO2Q6UXX9 243 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 LRRTM3Q86VH5 581 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 TMEM35BQ8NCS4 154 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 C1orf131Q8NDD1 294 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 SLC30A5Q8TAD4 765 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 ARNTL2Q8WYA1 636 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 EIF3CQ99613 913 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 ZNF518BQ9C0D4 1074 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 LHX5Q9H2C1 402 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 LUC7LQ9NQ29 371 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 KRT82Q9NSB4 513 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 NAGPAQ9UK23 515 aa16.78■□□□□ 0.28
TSPAN4-213ENST00000524895 A0A1W2PPC1 479 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 FAM170AA1A519 330 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 TMCO5BA8MYB1 307 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 H3BNC9 293 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 GRM6O15303 877 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 LPXNO60711 386 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 CXCL14O95715 111 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 CYP1A1P04798 512 aaPredicted RBP16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 SETSIPP0DME0 302 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 OR1D2P34982 312 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 NSFP46459 744 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 NDUFV1P49821 464 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 NOMO3P69849 1222 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 ROR1Q01973 937 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 BST2Q10589 180 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 SMARCB1Q12824 385 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 GPR17Q13304 367 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 PLPP4Q5VZY2 271 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 PPP1R2P3Q6NXS1 205 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 ALKBH5Q6P6C2 394 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 TOGARAM2Q6ZUX3 1019 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 TTC30AQ86WT1 665 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 ANKRD52Q8NB46 1076 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 UBA3Q8TBC4 463 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 SECISBP2LQ93073 1101 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 SMARCD1Q96GM5 515 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 PGLYRP2Q96PD5 576 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 NOX5Q96PH1 765 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 CLSTN3Q9BQT9 956 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 DESI2Q9BSY9 194 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 ABI2Q9NYB9 513 aaPredicted RBP16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 FNIP2Q9P278 1114 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 PCDHB5Q9Y5E4 795 aa16.77■□□□□ 0.28
TSPAN4-213ENST00000524895 ADAM12O43184 909 aa16.76■□□□□ 0.27
TSPAN4-213ENST00000524895 AP1G2O75843 785 aa16.76■□□□□ 0.27
TSPAN4-213ENST00000524895 LCA5LO95447 670 aa16.76■□□□□ 0.27
TSPAN4-213ENST00000524895 GZMAP12544 262 aa16.76■□□□□ 0.27
TSPAN4-213ENST00000524895 UNGP13051 313 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-213ENST00000524895 NPR3P17342 541 aa16.76■□□□□ 0.27
TSPAN4-213ENST00000524895 DNAJB1P25685 340 aa16.76■□□□□ 0.27
TSPAN4-213ENST00000524895 CDH5P33151 784 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-213ENST00000524895 ERVFC1P60507 584 aa16.76■□□□□ 0.27
TSPAN4-213ENST00000524895 KRT83P78385 493 aa16.76■□□□□ 0.27
TSPAN4-213ENST00000524895 CENPCQ03188 943 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms