RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 RCN1Q15293 331 aa12.08□□□□□ -0.48
PTPRK-217ENST00000524534 ACSBG2Q5FVE4 666 aa12.08□□□□□ -0.48
PTPRK-217ENST00000524534 CIAPIN1Q6FI81 312 aa12.08□□□□□ -0.48
PTPRK-217ENST00000524534 DNAJC24Q6P3W2 148 aa12.08□□□□□ -0.48
PTPRK-217ENST00000524534 LRRC6Q86X45 466 aa12.08□□□□□ -0.48
PTPRK-217ENST00000524534 RHPN2Q8IUC4 686 aa12.08□□□□□ -0.48
PTPRK-217ENST00000524534 SEPT12Q8IYM1 358 aa12.08□□□□□ -0.48
PTPRK-217ENST00000524534 FBXO36Q8NEA4 188 aa12.08□□□□□ -0.48
PTPRK-217ENST00000524534 SPDYE1Q8NFV5 336 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-217ENST00000524534 NRG4Q8WWG1 115 aa12.08□□□□□ -0.48
PTPRK-217ENST00000524534 ATP6V0A1Q93050 837 aa12.08□□□□□ -0.48
PTPRK-217ENST00000524534 FRMD8P1Q9BZ68 369 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-217ENST00000524534 POLR3FQ9H1D9 316 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-217ENST00000524534 SLC38A10Q9HBR0 1119 aa12.08□□□□□ -0.48
PTPRK-217ENST00000524534 EFR3BQ9Y2G0 817 aa12.08□□□□□ -0.48
PTPRK-217ENST00000524534 GOLGA8RI6L899 631 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 PIAS1O75925 651 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 LSM8O95777 96 aaKnown RBP12.07□□□□□ -0.48
PTPRK-217ENST00000524534 IL1BP01584 269 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 ETV4P43268 484 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 NEK3P51956 506 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 MXRA7P84157 204 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 KPNB1Q14974 876 aaKnown RBP12.07□□□□□ -0.48
PTPRK-217ENST00000524534 PRKD1Q15139 912 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-217ENST00000524534 SPDYE2Q495Y8 402 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 SNX30Q5VWJ9 437 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 TMEM154Q6P9G4 183 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 DCUN1D2Q6PH85 259 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 POLNQ7Z5Q5 900 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.07□□□□□ -0.48
PTPRK-217ENST00000524534 KCNN1Q92952 543 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 KLF6Q99612 283 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-217ENST00000524534 CGRRF1Q99675 332 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 SH3GL3Q99963 347 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 MMADHCQ9H3L0 296 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-217ENST00000524534 RBAKQ9NYW8 714 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-217ENST00000524534 LRCH1Q9Y2L9 728 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 WDR46O15213 610 aaKnown RBP12.07□□□□□ -0.48
PTPRK-217ENST00000524534 GYG2O15488 501 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 DKC1O60832 514 aaKnown RBP eCLIP12.07□□□□□ -0.489e-7■■■■■ 28.8
PTPRK-217ENST00000524534 KRT36O76013 467 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 PSMG1O95456 288 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 MMP10P09238 476 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 DLDP09622 509 aaKnown RBP12.07□□□□□ -0.48
PTPRK-217ENST00000524534 SP100P23497 879 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-217ENST00000524534 SERPINB3P29508 390 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 RPL22P35268 128 aaKnown RBP12.07□□□□□ -0.48
PTPRK-217ENST00000524534 OTUD4Q01804 1114 aaKnown RBP12.07□□□□□ -0.48
PTPRK-217ENST00000524534 TAP1Q03518 808 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 SLC34A1Q06495 639 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 DLGAP5Q15398 846 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 CCDC6Q16204 474 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 FAM91A1Q658Y4 838 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 RINLQ6ZS11 566 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 SH2D5Q6ZV89 423 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 ACTL9Q8TC94 416 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 PRR11Q96HE9 360 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-217ENST00000524534 TMEM120AQ9BXJ8 343 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 ZNF341Q9BYN7 854 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 CYP26B1Q9NR63 512 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 TAS2R1Q9NYW7 299 aa12.07□□□□□ -0.48
PTPRK-217ENST00000524534 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-217ENST00000524534 CNTNAP2Q9UHC6 1331 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 TCRBV7S3A2A0A539 114 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 LPXNO60711 386 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 TMEM63AO94886 807 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 PIGRP01833 764 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 ASNSP08243 561 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 NEFHP12036 1026 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 SESN3P58005 492 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 SLC18A2Q05940 514 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 ZBTB41Q5SVQ8 909 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 ARHGEF16Q5VV41 709 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 STYK1Q6J9G0 422 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 PALM2Q8IXS6 379 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 OR5B17Q8NGF7 314 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 SCG3Q8WXD2 468 aaKnown RBP12.06□□□□□ -0.48
PTPRK-217ENST00000524534 ZBTB45Q96K62 511 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-217ENST00000524534 TMEM39BQ9GZU3 492 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 SYNCQ9H7C4 482 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 C10orf88Q9H8K7 445 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 ALG13Q9NP73 1137 aaKnown RBP12.06□□□□□ -0.48
PTPRK-217ENST00000524534 FBXO6Q9NRD1 293 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-217ENST00000524534 STX18Q9P2W9 335 aaKnown RBP12.06□□□□□ -0.48
PTPRK-217ENST00000524534 SAE1Q9UBE0 346 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-217ENST00000524534 SMAPO00193 183 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 MAP3K13O43283 966 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 TBX10O75333 385 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 LDHAP00338 332 aaKnown RBP12.06□□□□□ -0.48
PTPRK-217ENST00000524534 MT-ND3P03897 115 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 RARBP10826 455 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 TAZQ16635 292 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 THEMIS2Q5TEJ8 643 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 SCARA3Q6AZY7 606 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 OR52E8Q6IFG1 317 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 SWSAP1Q6NVH7 229 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 XRRA1Q6P2D8 792 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 LRRC74BQ6ZQY2 392 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 BBS12Q6ZW61 710 aa12.06□□□□□ -0.48
PTPRK-217ENST00000524534 VSIG10LQ86VR7 867 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms