RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 PHKA2P46019 1235 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 RPL34P49207 117 aaKnown RBP5.74□□□□□ -1.49
CLINT1-208ENST00000524306 RAD23BP54727 409 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 SNX16P57768 344 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 RPL7AP62424 266 aaKnown RBP5.74□□□□□ -1.49
CLINT1-208ENST00000524306 SNX1Q13596 522 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 MOGSQ13724 837 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 LONRF1Q17RB8 773 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 KLHL38Q2WGJ6 581 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 P3H1Q32P28 736 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 WDR72Q3MJ13 1102 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 TMEM63BQ5T3F8 832 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 XYLT1Q86Y38 959 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 DCPSQ96C86 337 aaKnown RBP5.74□□□□□ -1.49
CLINT1-208ENST00000524306 TBCBQ99426 244 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 SYT17Q9BSW7 474 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 FHDC1Q9C0D6 1143 aaPredicted RBP5.74□□□□□ -1.49
CLINT1-208ENST00000524306 MTMR12Q9C0I1 747 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 RPF1Q9H9Y2 349 aaKnown RBP5.74□□□□□ -1.49
CLINT1-208ENST00000524306 RSAD1Q9HA92 442 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 IFT122Q9HBG6 1241 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 ANKFY1Q9P2R3 1169 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 DNPEPQ9ULA0 475 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.74□□□□□ -1.49
CLINT1-208ENST00000524306 THSD7BQ9C0I4 1608 aa5.74□□□□□ -1.49
CLINT1-208ENST00000524306 H0YHG0 523 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 TM9SF1O15321 606 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ZWINTO95229 277 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ACSL3O95573 720 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 KRT3P12035 628 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 OSBPP22059 807 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 KDELR1P24390 212 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 NF2P35240 595 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 TNFSF9P41273 254 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ZNF143P52747 638 aaPredicted RBP5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ARL4CP56559 192 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 CDK18Q07002 472 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 FSTL1Q12841 308 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 LAMC2Q13753 1193 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 PDK2Q15119 407 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 PDK4Q16654 411 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 AMHR2Q16671 573 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ZNF667Q5HYK9 610 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 TREML2Q5T2D2 321 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 CYB5D1Q6P9G0 228 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 DCUN1D2Q6PH85 259 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ADGRD1Q6QNK2 874 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 LCLAT1Q6UWP7 414 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 CYS1Q717R9 158 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 SPATA21Q7Z572 469 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 APBB1IPQ7Z5R6 666 aaPredicted RBP5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ATP11CQ8NB49 1132 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 SH3TC2Q8TF17 1288 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 TFAP2BQ92481 460 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ZBTB9Q96C00 473 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ANKRD27Q96NW4 1050 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 MCEEQ96PE7 176 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 TMEM237Q96Q45 408 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 CDT1Q9H211 546 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 VTA1Q9NP79 307 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ASNSD1Q9NWL6 643 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 MKS1Q9NXB0 559 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ERAP1Q9NZ08 941 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 PSMC3IPQ9P2W1 217 aaPredicted RBP5.73□□□□□ -1.49
CLINT1-208ENST00000524306 SIX4Q9UIU6 781 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 GJA3Q9Y6H8 435 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 VGLL3A8MV65 326 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 CHADO15335 359 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 TYROBPO43914 113 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 LRCH4O75427 683 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 CD58P19256 250 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 TAC1P20366 129 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 YARSP54577 528 aaKnown RBP5.73□□□□□ -1.49
CLINT1-208ENST00000524306 GEMIN4P57678 1058 aaKnown RBP5.73□□□□□ -1.49
CLINT1-208ENST00000524306 TFDP2Q14188 446 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 SPARCL1Q14515 664 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 TTLL4Q14679 1199 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 DBN1Q16643 649 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 PTPN20Q4JDL3 420 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 UBAP2Q5T6F2 1119 aaKnown RBP5.73□□□□□ -1.49
CLINT1-208ENST00000524306 LMBRD2Q68DH5 695 aaPredicted RBP5.73□□□□□ -1.49
CLINT1-208ENST00000524306 DPY19L2Q6NUT2 758 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 FAM43BQ6ZT52 329 aaPredicted RBP5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ASRGL1Q7L266 308 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ZNF410Q86VK4 478 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 PARP9Q8IXQ6 854 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ARFGAP1Q8N6T3 406 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 RNF149Q8NC42 400 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 FAF2Q96CS3 445 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 LRRC39Q96DD0 335 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 TMEM176AQ96HP8 235 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ACSS3Q9H6R3 686 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 ZNF148Q9UQR1 794 aa5.73□□□□□ -1.49
CLINT1-208ENST00000524306 F8VP50 259 aa5.72□□□□□ -1.49
CLINT1-208ENST00000524306 TRAFD1O14545 582 aaPredicted RBP5.72□□□□□ -1.49
CLINT1-208ENST00000524306 PPP1R12AO14974 1030 aaPredicted RBP5.72□□□□□ -1.49
CLINT1-208ENST00000524306 TRUB2O95900 331 aaKnown RBP5.72□□□□□ -1.49
CLINT1-208ENST00000524306 ATP5BP06576 529 aaKnown RBP5.72□□□□□ -1.49
CLINT1-208ENST00000524306 VIMP08670 466 aaKnown RBP5.72□□□□□ -1.49
CLINT1-208ENST00000524306 PECAM1P16284 738 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms