RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 SCNN1GP51170 649 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 MXRA7P84157 204 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 AMOTQ4VCS5 1084 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.92□□□□□ -1.3
SKP1-213ENST00000524288 Q6ZRM9 215 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 USP49Q70CQ1 688 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 CFAP52Q8N1V2 620 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 GLIS1Q8NBF1 620 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 MDGA1Q8NFP4 955 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 NEU4Q8WWR8 484 aaPredicted RBP6.92□□□□□ -1.3
SKP1-213ENST00000524288 PRRX2Q99811 253 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 ZSWIM1Q9BR11 485 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.92□□□□□ -1.3
SKP1-213ENST00000524288 HESX1Q9UBX0 185 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 GOLGA6L6A8MZA4 724 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 OVOL3O00110 214 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 DCLK1O15075 740 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 TNFRSF6BO95407 300 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 CHEK2O96017 543 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 CKBP12277 381 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 FDXRP22570 491 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 PLA1AQ53H76 456 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 ARHGAP15Q53QZ3 475 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 TSHZ3Q63HK5 1081 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 TAPT1Q6NXT6 567 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 CATSPERGQ6ZRH7 1159 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 PPP1R32Q7Z5V6 425 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 KCTD20Q7Z5Y7 419 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 ZNF280BQ86YH2 543 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 YAF2Q8IY57 180 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 STYXQ8WUJ0 223 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 TRIM63Q969Q1 353 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 LTV1Q96GA3 475 aaPredicted RBP6.91□□□□□ -1.3
SKP1-213ENST00000524288 TRIB1Q96RU8 372 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 RMDN3Q96TC7 470 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 SMOQ99835 787 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 GPR87Q9BY21 358 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 SMOC2Q9H3U7 446 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 ETAA1Q9NY74 926 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 FAM30AQ9NZY2 134 aa6.91□□□□□ -1.3
SKP1-213ENST00000524288 REXO2Q9Y3B8 237 aaKnown RBP6.91□□□□□ -1.3
SKP1-213ENST00000524288 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 CLCA1A8K7I4 914 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 PIP5K1BO14986 540 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 TLR5O60602 858 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 ACVR2AP27037 513 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 APOBEC3AP31941 199 aaPredicted RBP6.9□□□□□ -1.3
SKP1-213ENST00000524288 PTGS2P35354 604 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 TOB1P50616 345 aaPredicted RBP6.9□□□□□ -1.3
SKP1-213ENST00000524288 RABGGTBP53611 331 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 LILRA4P59901 499 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 NHLH2Q02577 135 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 KRT17Q04695 432 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 TOB2Q14106 344 aaPredicted RBP6.9□□□□□ -1.3
SKP1-213ENST00000524288 SLC29A2Q14542 456 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 KCNAB1Q14722 419 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 RAB30Q15771 203 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 ZACNQ401N2 412 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 C1QL3Q5VWW1 255 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 NAIF1Q69YI7 327 aaPredicted RBP6.9□□□□□ -1.3
SKP1-213ENST00000524288 CRTC1Q6UUV9 634 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 CCDC150Q8NCX0 1101 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 PSD4Q8NDX1 1056 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 NUP133Q8WUM0 1156 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 IPCEF1Q8WWN9 437 aaPredicted RBP6.9□□□□□ -1.3
SKP1-213ENST00000524288 LARP4BQ92615 738 aaKnown RBP6.9□□□□□ -1.3
SKP1-213ENST00000524288 LRIG1Q96JA1 1093 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 SORBS1Q9BX66 1292 aaKnown RBP6.9□□□□□ -1.3
SKP1-213ENST00000524288 MAGEB5Q9BZ81 275 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 SIK2Q9H0K1 926 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 MAGEH1Q9H213 219 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 AGO4Q9HCK5 861 aaKnown RBP6.9□□□□□ -1.3
SKP1-213ENST00000524288 SAGE1Q9NXZ1 904 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 DACT1Q9NYF0 836 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 IGSF9Q9P2J2 1179 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 HSFX1Q9UBD0 423 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 ATP11BQ9Y2G3 1177 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 USP15Q9Y4E8 981 aaPredicted RBP6.9□□□□□ -1.3
SKP1-213ENST00000524288 PAXBP1Q9Y5B6 917 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 XDHP47989 1333 aa6.9□□□□□ -1.3
SKP1-213ENST00000524288 GOLGA6L3A6NEY3 463 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 ACKR2O00590 384 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 NPC1O15118 1278 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 WDHD1O75717 1129 aaPredicted RBP6.89□□□□□ -1.31
SKP1-213ENST00000524288 A1BGP04217 495 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 BTF3P20290 206 aaKnown RBP6.89□□□□□ -1.31
SKP1-213ENST00000524288 GCSHP23434 173 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 MGAT1P26572 445 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 GABRB3P28472 473 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 INHBEP58166 350 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 RNASE9P60153 205 aaKnown RBP6.89□□□□□ -1.31
SKP1-213ENST00000524288 MC2RQ01718 297 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 DCAF17Q5H9S7 520 aaPredicted RBP6.89□□□□□ -1.31
SKP1-213ENST00000524288 CACHD1Q5VU97 1274 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 TAF2Q6P1X5 1199 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 CACNA2D3Q8IZS8 1091 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 SDR16C5Q8N3Y7 309 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 VGLL2Q8N8G2 317 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 TBC1D20Q96BZ9 403 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 PPP1R9BQ96SB3 815 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms