RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 VPS52Q8N1B4 723 aa9.9□□□□□ -0.83
SDCBP-212ENST00000523483 MYLPFQ96A32 169 aa9.9□□□□□ -0.83
SDCBP-212ENST00000523483 ARHGEF26Q96DR7 871 aa9.9□□□□□ -0.83
SDCBP-212ENST00000523483 TTPALQ9BTX7 342 aa9.9□□□□□ -0.83
SDCBP-212ENST00000523483 CWH43Q9H720 699 aa9.9□□□□□ -0.83
SDCBP-212ENST00000523483 DSEQ9UL01 958 aa9.9□□□□□ -0.83
SDCBP-212ENST00000523483 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.9□□□□□ -0.83
SDCBP-212ENST00000523483 SZT2Q5T011 3432 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 H0YGN5 161 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 RTN2O75298 545 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 AP1G2O75843 785 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 CA3P07451 260 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 WARSP23381 471 aaKnown RBP9.89□□□□□ -0.83
SDCBP-212ENST00000523483 NOMO3P69849 1222 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 ZNF280DQ6N043 979 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 TMC7Q7Z402 723 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 ZNF677Q86XU0 584 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 SPATA2LQ8IUW3 424 aaPredicted RBP9.89□□□□□ -0.83
SDCBP-212ENST00000523483 REXO1L1PQ8IX06 675 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 ATAD1Q8NBU5 361 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 GPR152Q8TDT2 470 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 BTBD6Q96KE9 485 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 KCNK16Q96T55 309 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 RAD9AQ99638 391 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 SEPT5Q99719 369 aaPredicted RBP9.89□□□□□ -0.83
SDCBP-212ENST00000523483 SPG21Q9NZD8 308 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 ENC1O14682 589 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 SOAT2O75908 522 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 LAG3P18627 525 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 GRIK1P39086 918 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 KRT17Q04695 432 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 ZFYVE27Q5T4F4 411 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 OR6B2Q6IFH4 312 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 DCUN1D2Q6PH85 259 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 TTC30AQ86WT1 665 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 IPO4Q8TEX9 1081 aaKnown RBP9.89□□□□□ -0.83
SDCBP-212ENST00000523483 AAASQ9NRG9 546 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 PCDHB8Q9UN66 801 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 CNTN6Q9UQ52 1028 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 SLC27A5Q9Y2P5 690 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.89□□□□□ -0.83
SDCBP-212ENST00000523483 INPPL1O15357 1258 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 URODP06132 367 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 FAM200BP0CF97 657 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 OR1D2P34982 312 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 GJC1P36383 396 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 CNGA2Q16280 664 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 USP41Q3LFD5 358 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 ACAD10Q6JQN1 1059 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 LRRTM3Q86VH5 581 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 SCUBE3Q8IX30 993 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 FUKQ8N0W3 1084 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 KLHL23Q8NBE8 558 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 COLGALT1Q8NBJ5 622 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 FAM149B1Q96BN6 582 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 CPXM1Q96SM3 734 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 SLC9A7Q96T83 725 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 C17orf80Q9BSJ5 609 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 B3GNT5Q9BYG0 378 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 TMLHEQ9NVH6 421 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 SALL4Q9UJQ4 1053 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 RALGAPA2Q2PPJ7 1873 aa9.89□□□□□ -0.83
SDCBP-212ENST00000523483 M0QZQ0 153 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 FGF18O76093 207 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 SPATA31D3P0C874 917 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 CYP2F1P24903 491 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 AARSP49588 968 aaKnown RBP eCLIP9.88□□□□□ -0.83
SDCBP-212ENST00000523483 ELAVL2Q12926 359 aaKnown RBP9.88□□□□□ -0.83
SDCBP-212ENST00000523483 MGAT5BQ3V5L5 792 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 PTPN20Q4JDL3 420 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 SPATA31D4Q6ZUB0 917 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 CMTR2Q8IYT2 770 aaKnown RBP9.88□□□□□ -0.83
SDCBP-212ENST00000523483 HERVK_113Q902F9 699 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 NDRG1Q92597 394 aaKnown RBP9.88□□□□□ -0.83
SDCBP-212ENST00000523483 ZNF689Q96CS4 500 aaPredicted RBP9.88□□□□□ -0.83
SDCBP-212ENST00000523483 TMEM175Q9BSA9 504 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 LRRC4Q9HBW1 653 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 CYTH4Q9UIA0 394 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 CDH9Q9ULB4 789 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 USTQ9Y2C2 406 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 ALPK3Q96L96 1907 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 MYH10P35580 1976 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 ANKRD62A6NC57 917 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 E5RJQ4 531 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 GABRDO14764 452 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 BEST1O76090 585 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 PBX2P40425 430 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 PDCLQ13371 301 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 MESDQ14696 234 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 PSMD5Q16401 504 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 INTS6LQ5JSJ4 861 aaKnown RBP9.88□□□□□ -0.83
SDCBP-212ENST00000523483 LIN9Q5TKA1 542 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 PMF1Q6P1K2 205 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 TXLNBQ8N3L3 684 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 TTC16Q8NEE8 873 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 SLC35G2Q8TBE7 412 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 RTP3Q9BQQ7 232 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 SYT11Q9BT88 431 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 NUP85Q9BW27 656 aa9.88□□□□□ -0.83
SDCBP-212ENST00000523483 ENTPD7Q9NQZ7 604 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms