RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 ATP2A3Q93084 1043 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 SPATA17Q96L03 361 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 ACCSQ96QU6 501 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 TMLHEQ9NVH6 421 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 ABI2Q9NYB9 513 aaPredicted RBP10.1□□□□□ -0.79
SDC2-207ENST00000522911 CCDC39Q9UFE4 941 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 L1RE1Q9UN81 338 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 USP24Q9UPU5 2620 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 MYMKA6NI61 221 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 USP17L7P0C7H9 530 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 POLR2BP30876 1174 aaKnown RBP10.09□□□□□ -0.79
SDC2-207ENST00000522911 GJA4P35212 333 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 SRSF5Q13243 272 aaKnown RBP10.09□□□□□ -0.79
SDC2-207ENST00000522911 MAPRE1Q15691 268 aaKnown RBP10.09□□□□□ -0.79
SDC2-207ENST00000522911 TXNDC8Q6A555 127 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 CC2D1AQ6P1N0 951 aaPredicted RBP10.09□□□□□ -0.79
SDC2-207ENST00000522911 PKN3Q6P5Z2 889 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 SV2BQ7L1I2 683 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 C11orf74Q86VG3 221 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 CPA6Q8N4T0 437 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 FSIP1Q8NA03 581 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 RASSF8Q8NHQ8 419 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 RIN3Q8TB24 985 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 GIPC2Q8TF65 315 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 ACDQ96AP0 544 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 EPSTI1Q96J88 318 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 P2RY13Q9BPV8 354 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 TTLL2Q9BWV7 592 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 ZHX3Q9H4I2 956 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 EBF3Q9H4W6 596 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 ECT2Q9H8V3 914 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 MRPL44Q9H9J2 332 aaKnown RBP10.09□□□□□ -0.79
SDC2-207ENST00000522911 DDX43Q9NXZ2 648 aaKnown RBP10.09□□□□□ -0.79
SDC2-207ENST00000522911 GCNT4Q9P109 453 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 SIX4Q9UIU6 781 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 FBXO2Q9UK22 296 aaPredicted RBP10.09□□□□□ -0.79
SDC2-207ENST00000522911 GREB1Q4ZG55 1949 aa10.09□□□□□ -0.79
SDC2-207ENST00000522911 CNOT1A5YKK6 2376 aaKnown RBP10.09□□□□□ -0.79
SDC2-207ENST00000522911 CEP295Q9C0D2 2601 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 GDF9O60383 454 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 RNF40O75150 1001 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 PRPF40AO75400 957 aaKnown RBP10.08□□□□□ -0.8
SDC2-207ENST00000522911 ITGB3P05106 788 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 CYP2F1P24903 491 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 PMLP29590 882 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 TXLNAP40222 546 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 PPP3CCP48454 512 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 WNT7BP56706 349 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 RBP5P82980 135 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 TFAMQ00059 246 aaKnown RBP10.08□□□□□ -0.8
SDC2-207ENST00000522911 KCNA1Q09470 495 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 NR1H3Q13133 447 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 MTF1Q14872 753 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 SURF1Q15526 300 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 SOWAHAQ2M3V2 549 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 EML3Q32P44 896 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 PLK5Q496M5 336 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 RRAGBQ5VZM2 374 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 HEATR6Q6AI08 1181 aaKnown RBP10.08□□□□□ -0.8
SDC2-207ENST00000522911 CNNM4Q6P4Q7 775 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 C4orf50Q6ZRC1 276 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 CCDC73Q6ZRK6 1079 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 USP49Q70CQ1 688 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 DYMQ7RTS9 669 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 KBTBD6Q86V97 674 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 DUSP9Q99956 384 aaKnown RBP10.08□□□□□ -0.8
SDC2-207ENST00000522911 FAM213AQ9BRX8 229 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 PI4K2AQ9BTU6 479 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 SMG9Q9H0W8 520 aaKnown RBP10.08□□□□□ -0.8
SDC2-207ENST00000522911 UPF2Q9HAU5 1272 aaKnown RBP10.08□□□□□ -0.8
SDC2-207ENST00000522911 FBRSL1Q9HCM7 1045 aaKnown RBP10.08□□□□□ -0.8
SDC2-207ENST00000522911 VPS45Q9NRW7 570 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 RBAKQ9NYW8 714 aaPredicted RBP10.08□□□□□ -0.8
SDC2-207ENST00000522911 EHD2Q9NZN4 543 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 ARHGAP26Q9UNA1 814 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 AGAP1Q9UPQ3 857 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 SLC8A2Q9UPR5 921 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 CHD6Q8TD26 2715 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 OBSL1O75147 1896 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 WDFY3Q8IZQ1 3526 aa10.08□□□□□ -0.8
SDC2-207ENST00000522911 FRYQ5TBA9 3013 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 TRAV19A0A0A6YYK7 116 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 AXIN1O15169 862 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 APBB3O95704 486 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 OLFM2O95897 454 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 EGFP01133 1207 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 ARSAP15289 507 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 EIF2DP41214 584 aaKnown RBP10.07□□□□□ -0.8
SDC2-207ENST00000522911 GALK1P51570 392 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 NOP14P78316 857 aaKnown RBP10.07□□□□□ -0.8
SDC2-207ENST00000522911 MYO1EQ12965 1108 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 ELF2Q15723 593 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 DDR2Q16832 855 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 HSF5Q4G112 596 aaPredicted RBP10.07□□□□□ -0.8
SDC2-207ENST00000522911 TRIM68Q6AZZ1 485 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 IL31Q6EBC2 164 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 GPIHBP1Q8IV16 184 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 ADGRF2Q8IZF7 708 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 CSGALNACT2Q8N6G5 542 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 C12orf50Q8NA57 414 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms