RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 TMEM151BQ8IW70 566 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 CCDC60Q8IWA6 550 aaPredicted RBP7.49□□□□□ -1.21
SDCBP-210ENST00000522843 TMEM87AQ8NBN3 555 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 SMG7Q92540 1137 aaKnown RBP7.49□□□□□ -1.21
SDCBP-210ENST00000522843 STAMQ92783 540 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 SHDQ96IW2 340 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 MRPL9Q9BYD2 267 aaKnown RBP7.49□□□□□ -1.21
SDCBP-210ENST00000522843 GCM1Q9NP62 436 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 KCNH7Q9NS40 1196 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 CEP131Q9UPN4 1083 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 WASF3Q9UPY6 502 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 SDK1Q7Z5N4 2213 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 NFASCO94856 1347 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 RALGAPA1Q6GYQ0 2036 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 MAST4O15021 2626 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 ITPR1Q14643 2758 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 MTCL1Q9Y4B5 1905 aaKnown RBP7.48□□□□□ -1.21
SDCBP-210ENST00000522843 COL1A2P08123 1366 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 LRP3O75074 770 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 CSDE1O75534 798 aaKnown RBP7.48□□□□□ -1.21
SDCBP-210ENST00000522843 OFD1O75665 1012 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 DDHD2O94830 711 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 ZSCAN20P17040 1043 aaPredicted RBP7.48□□□□□ -1.21
SDCBP-210ENST00000522843 HOXC13P31276 330 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 NLRP11P59045 1033 aaKnown RBP7.48□□□□□ -1.21
SDCBP-210ENST00000522843 TRAF1Q13077 416 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 SRSF5Q13243 272 aaKnown RBP7.48□□□□□ -1.21
SDCBP-210ENST00000522843 ZNF484Q5JVG2 852 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 LRSAM1Q6UWE0 723 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 UNQ6494/PRO21346Q6UXR6 183 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 CYP26C1Q6V0L0 522 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 BNC2Q6ZN30 1099 aaPredicted RBP7.48□□□□□ -1.21
SDCBP-210ENST00000522843 TSPYL5Q86VY4 417 aaPredicted RBP7.48□□□□□ -1.21
SDCBP-210ENST00000522843 RNF168Q8IYW5 571 aaPredicted RBP7.48□□□□□ -1.21
SDCBP-210ENST00000522843 DNAJB8Q8NHS0 232 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 TNPO1Q92973 898 aaKnown RBP7.48□□□□□ -1.21
SDCBP-210ENST00000522843 CCDC136Q96JN2 1154 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 TMEM87BQ96K49 555 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 SGPP1Q9BX95 441 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 HELZ2Q9BYK8 2649 aaKnown RBP7.48□□□□□ -1.21
SDCBP-210ENST00000522843 NT5C3AQ9H0P0 336 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 RXFP1Q9HBX9 757 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 MARCH5Q9NX47 278 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 CORINQ9Y5Q5 1042 aa7.48□□□□□ -1.21
SDCBP-210ENST00000522843 NOTCH4Q99466 2003 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 SRRM3A6NNA2 597 aaPredicted RBP7.47□□□□□ -1.21
SDCBP-210ENST00000522843 F8W810 466 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 MAFGO15525 162 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 TOP3BO95985 862 aaKnown RBP7.47□□□□□ -1.21
SDCBP-210ENST00000522843 DARSP14868 501 aaKnown RBP7.47□□□□□ -1.21
SDCBP-210ENST00000522843 MAGEA9P43362 315 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 RPS9P46781 194 aaKnown RBP7.47□□□□□ -1.21
SDCBP-210ENST00000522843 SLC26A2P50443 739 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 GPC3P51654 580 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 NTHL1P78549 312 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 CAMK2GQ13555 558 aaPredicted RBP7.47□□□□□ -1.21
SDCBP-210ENST00000522843 NOMO2Q5JPE7 1267 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 ZBTB41Q5SVQ8 909 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 TPRG1Q6ZUI0 275 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 LRRC71Q8N4P6 559 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 METTL13Q8N6R0 699 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 CELF5Q8N6W0 485 aaKnown RBP7.47□□□□□ -1.21
SDCBP-210ENST00000522843 CRELD1Q96HD1 420 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 RPS6KC1Q96S38 1066 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 MXRA8Q9BRK3 442 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 UBAC1Q9BSL1 405 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 MYL10Q9BUA6 226 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 HERC2P3Q9BVR0 1158 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 FAM126AQ9BYI3 521 aaPredicted RBP7.47□□□□□ -1.21
SDCBP-210ENST00000522843 GBP3Q9H0R5 595 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 AGO4Q9HCK5 861 aaKnown RBP7.47□□□□□ -1.21
SDCBP-210ENST00000522843 MRPL17Q9NRX2 175 aaKnown RBP7.47□□□□□ -1.21
SDCBP-210ENST00000522843 PCDHA6Q9UN73 950 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 INPP5FQ9Y2H2 1132 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 PCDHA8Q9Y5H6 950 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 LAMA1P25391 3075 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 CELSR3Q9NYQ7 3312 aa7.47□□□□□ -1.21
SDCBP-210ENST00000522843 IGSF10Q6WRI0 2623 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 CYSRT1A8MQ03 144 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 DDX39AO00148 427 aaKnown RBP7.46□□□□□ -1.22
SDCBP-210ENST00000522843 TAF4O00268 1085 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 NRP1O14786 923 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 TGM5O43548 720 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 TRIM13O60858 407 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 KCNK5O95279 499 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 GLUD1P00367 558 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 PF4P02776 101 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 SOD2P04179 222 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 LIMK1P53667 647 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 PDE1AP54750 535 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 AK2P54819 239 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 DRP2Q13474 957 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 HDAC1Q13547 482 aaPredicted RBP7.46□□□□□ -1.22
SDCBP-210ENST00000522843 SF3A2Q15428 464 aaKnown RBP7.46□□□□□ -1.22
SDCBP-210ENST00000522843 SWSAP1Q6NVH7 229 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 RSPO2Q6UXX9 243 aaPredicted RBP7.46□□□□□ -1.22
SDCBP-210ENST00000522843 CENPQQ7L2Z9 268 aaPredicted RBP7.46□□□□□ -1.22
SDCBP-210ENST00000522843 MCATQ8IVS2 390 aaKnown RBP7.46□□□□□ -1.22
SDCBP-210ENST00000522843 CXorf38Q8TB03 319 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 ITFG1Q8TB96 612 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms