RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 PRRG1O14668 218 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 TBX3O15119 743 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 SLC37A4O43826 429 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 ITPKAP23677 461 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 HOXA11P31270 313 aaPredicted RBP6.86□□□□□ -1.31
PABPC1-220ENST00000522658 CCR3P51677 355 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 YARSP54577 528 aaKnown RBP6.86□□□□□ -1.31
PABPC1-220ENST00000522658 ZNF211Q13398 564 aaPredicted RBP6.86□□□□□ -1.31
PABPC1-220ENST00000522658 TRIM29Q14134 588 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 CTTNQ14247 550 aaKnown RBP6.86□□□□□ -1.31
PABPC1-220ENST00000522658 ST3GAL2Q16842 350 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 HP1BP3Q5SSJ5 553 aaPredicted RBP6.86□□□□□ -1.31
PABPC1-220ENST00000522658 UBXN11Q5T124 520 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 AXDND1Q5T1B0 1012 aaPredicted RBP6.86□□□□□ -1.31
PABPC1-220ENST00000522658 IL31Q6EBC2 164 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.86□□□□□ -1.31
PABPC1-220ENST00000522658 PIK3AP1Q6ZUJ8 805 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 DAGLBQ8NCG7 672 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 FEZF2Q8TBJ5 459 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 NETO1Q8TDF5 533 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 DDX1Q92499 740 aaKnown RBP6.86□□□□□ -1.31
PABPC1-220ENST00000522658 WASF1Q92558 559 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 FGF14Q92915 247 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 IER2Q9BTL4 223 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 GPR62Q9BZJ7 368 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 POLR3FQ9H1D9 316 aaPredicted RBP6.86□□□□□ -1.31
PABPC1-220ENST00000522658 CHST7Q9NS84 486 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 KCNH3Q9ULD8 1083 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 CYP46A1Q9Y6A2 500 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 TDRD15B5MCY1 1934 aaKnown RBP6.86□□□□□ -1.31
PABPC1-220ENST00000522658 VPS13AQ96RL7 3174 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 F8W810 466 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 ZNF197O14709 1029 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 FOXD2O60548 495 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-220ENST00000522658 LRRN2O75325 713 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 RHOP08100 348 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 JUNBP17275 347 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-220ENST00000522658 ARF4P18085 180 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-220ENST00000522658 RAB6AP20340 208 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 CD72P21854 359 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 RPS9P46781 194 aaKnown RBP6.85□□□□□ -1.31
PABPC1-220ENST00000522658 NTHL1P78549 312 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 CYP27A1Q02318 531 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 MBTD1Q05BQ5 628 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 ADCY1Q08828 1119 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 PRPF4BQ13523 1007 aaKnown RBP6.85□□□□□ -1.31
PABPC1-220ENST00000522658 CAPSQ13938 189 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 LRRC32Q14392 662 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 CALCRLQ16602 461 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 MAPK6Q16659 721 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 DCAF4L1Q3SXM0 396 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 AASDHQ4L235 1098 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-220ENST00000522658 RTP2Q5QGT7 225 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 CYP4A22Q5TCH4 519 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 LAIR1Q6GTX8 287 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 IQCEQ6IPM2 695 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 ANKS3Q6ZW76 656 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 PDZD4Q76G19 769 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-220ENST00000522658 CEP68Q76N32 757 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 RTL10Q7L3V2 364 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 MAEAQ7L5Y9 396 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 DYMQ7RTS9 669 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 CDR2LQ86X02 465 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-220ENST00000522658 YAF2Q8IY57 180 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 RNF168Q8IYW5 571 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-220ENST00000522658 POU5F2Q8N7G0 328 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 SUMF1Q8NBK3 374 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 AGBL5Q8NDL9 886 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 MCPH1Q8NEM0 835 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 ERMNQ8TAM6 284 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 DEPTORQ8TB45 409 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 CSGALNACT1Q8TDX6 532 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 RABGGTAQ92696 567 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 DNASE1L2Q92874 299 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 MCRS1Q96EZ8 462 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 IFT74Q96LB3 600 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 MBOAT7Q96N66 472 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 UROC1Q96N76 676 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 CEP89Q96ST8 783 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 NFKBIZQ9BYH8 718 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 EPC1Q9H2F5 836 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 ZFYVE1Q9HBF4 777 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 HEBP1Q9NRV9 189 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 TOPORSQ9NS56 1045 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-220ENST00000522658 GDE1Q9NZC3 331 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 RGL1Q9NZL6 768 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 DLGAP2Q9P1A6 1054 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 VAV3Q9UKW4 847 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 SNX14Q9Y5W7 946 aa6.85□□□□□ -1.31
PABPC1-220ENST00000522658 ARID1BQ8NFD5 2236 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-220ENST00000522658 WDR81Q562E7 1941 aa6.84□□□□□ -1.31
PABPC1-220ENST00000522658 RIF1Q5UIP0 2472 aaKnown RBP6.84□□□□□ -1.31
PABPC1-220ENST00000522658 ARHGEF35A5YM69 484 aa6.84□□□□□ -1.31
PABPC1-220ENST00000522658 H7C4K7 107 aa6.84□□□□□ -1.31
PABPC1-220ENST00000522658 ADAMTS3O15072 1205 aa6.84□□□□□ -1.31
PABPC1-220ENST00000522658 NEMFO60524 1076 aa6.84□□□□□ -1.31
PABPC1-220ENST00000522658 LRP3O75074 770 aa6.84□□□□□ -1.31
PABPC1-220ENST00000522658 ECI2O75521 394 aa6.84□□□□□ -1.31
PABPC1-220ENST00000522658 RECQL4O94761 1208 aa6.84□□□□□ -1.31
PABPC1-220ENST00000522658 B3GAT3O94766 335 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms