RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 MAPK6Q16659 721 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 DCAF4L1Q3SXM0 396 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 PLPP4Q5VZY2 271 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 TMEM184AQ6ZMB5 413 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 REC114Q7Z4M0 266 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 DDX53Q86TM3 631 aaKnown RBP6.49□□□□□ -1.37
SPIDR-216ENST00000521918 FAM178BQ8IXR5 827 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 TMEM161BQ8NDZ6 487 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 DEPTORQ8TB45 409 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 URGCPQ8TCY9 931 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 LARP4BQ92615 738 aaKnown RBP6.49□□□□□ -1.37
SPIDR-216ENST00000521918 RAD54LQ92698 747 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 TMEM169Q96HH4 297 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 IFT74Q96LB3 600 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 DRC1Q96MC2 740 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 GAD1Q99259 594 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 PLIN2Q99541 437 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 CDCA3Q99618 268 aaPredicted RBP6.49□□□□□ -1.37
SPIDR-216ENST00000521918 ACO2Q99798 780 aaKnown RBP6.49□□□□□ -1.37
SPIDR-216ENST00000521918 TCF25Q9BQ70 676 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 REEP2Q9BRK0 252 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 TMEM175Q9BSA9 504 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 NT5C1AQ9BXI3 368 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 CCSER1Q9C0I3 900 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 TGIF2Q9GZN2 237 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 WNT10AQ9GZT5 417 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 ZSCAN16Q9H4T2 348 aaPredicted RBP6.49□□□□□ -1.37
SPIDR-216ENST00000521918 C17orf75Q9HAS0 396 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 PIDD1Q9HB75 910 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 NGRNQ9NPE2 291 aaKnown RBP6.49□□□□□ -1.37
SPIDR-216ENST00000521918 CD320Q9NPF0 282 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 UBP1Q9NZI7 540 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 STOML1Q9UBI4 398 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 ODF2LQ9ULJ1 636 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 BARX2Q9UMQ3 279 aaPredicted RBP6.49□□□□□ -1.37
SPIDR-216ENST00000521918 TNFSF13BQ9Y275 285 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 POLR3KQ9Y2Y1 108 aaPredicted RBP6.49□□□□□ -1.37
SPIDR-216ENST00000521918 MYH11P35749 1972 aa6.49□□□□□ -1.37
SPIDR-216ENST00000521918 DMDP11532 3685 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 FSD2A1L4K1 749 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 NRP1O14786 923 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 PER2O15055 1255 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 SLC16A4O15374 487 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 MBTPS2O43462 519 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 FAM189A1O60320 539 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 RECQL4O94761 1208 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 SOD2P04179 222 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 CTSAP10619 480 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 ITGB7P26010 798 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 UBA7P41226 1012 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 PEX3P56589 373 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 KRT17Q04695 432 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 RNASELQ05823 741 aaKnown RBP6.48□□□□□ -1.37
SPIDR-216ENST00000521918 ZP2Q05996 745 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 NCBP1Q09161 790 aaKnown RBP6.48□□□□□ -1.37
SPIDR-216ENST00000521918 GRIK3Q13003 919 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 SMAD4Q13485 552 aaKnown RBP6.48□□□□□ -1.37
SPIDR-216ENST00000521918 PKP1Q13835 747 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 SMC1AQ14683 1233 aaKnown RBP6.48□□□□□ -1.37
SPIDR-216ENST00000521918 ZRSR1Q15695 479 aaKnown RBP6.48□□□□□ -1.37
SPIDR-216ENST00000521918 XKR4Q5GH76 650 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 SPECC1Q5M775 1068 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 ATF7IP2Q5U623 682 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 RBM23Q86U06 439 aaKnown RBP6.48□□□□□ -1.37
SPIDR-216ENST00000521918 GPBP1Q86WP2 473 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 HSCBQ8IWL3 235 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 VPS52Q8N1B4 723 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 MRPL43Q8N983 215 aaKnown RBP6.48□□□□□ -1.37
SPIDR-216ENST00000521918 LINC00301Q8NCQ3 95 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 AUTS2Q8WXX7 1259 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 SUSD6Q92537 303 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 GATA6Q92908 595 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 PPP2R3CQ969Q6 453 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 CALML4Q96GE6 196 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 EPSTI1Q96J88 318 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 CDK5RAP3Q96JB5 506 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 CLIC6Q96NY7 704 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 PPP1R10Q96QC0 940 aaKnown RBP6.48□□□□□ -1.37
SPIDR-216ENST00000521918 PAAF1Q9BRP4 392 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 HERC2P3Q9BVR0 1158 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 YIPF2Q9BWQ6 316 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 APOL6Q9BWW8 343 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 TRIM6Q9C030 488 aaPredicted RBP6.48□□□□□ -1.37
SPIDR-216ENST00000521918 HAPLN2Q9GZV7 340 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 GBP3Q9H0R5 595 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 CDT1Q9H211 546 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 S1PR5Q9H228 398 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 TLE6Q9H808 572 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 ENTPD7Q9NQZ7 604 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 C1GALT1Q9NS00 363 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 SNTG2Q9NY99 539 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.48□□□□□ -1.37
SPIDR-216ENST00000521918 TRIP11Q15643 1979 aa6.48□□□□□ -1.37
SPIDR-216ENST00000521918 PDCD11Q14690 1871 aaKnown RBP6.47□□□□□ -1.37
SPIDR-216ENST00000521918 DENND4AQ7Z401 1863 aa6.47□□□□□ -1.37
SPIDR-216ENST00000521918 WDFY4Q6ZS81 3184 aa6.47□□□□□ -1.37
SPIDR-216ENST00000521918 MUC6Q6W4X9 2439 aa6.47□□□□□ -1.37
SPIDR-216ENST00000521918 VWA8A3KMH1 1905 aa6.47□□□□□ -1.37
SPIDR-216ENST00000521918 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.47□□□□□ -1.37
SPIDR-216ENST00000521918 FRMD3A2A2Y4 597 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms