RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 DIS3L2Q8IYB7 885 aaKnown RBP9.62□□□□□ -0.87
MRPS28-207ENST00000521434 DAW1Q8N136 415 aa9.62□□□□□ -0.87
MRPS28-207ENST00000521434 HDDC3Q8N4P3 179 aa9.62□□□□□ -0.87
MRPS28-207ENST00000521434 MDGA1Q8NFP4 955 aa9.62□□□□□ -0.87
MRPS28-207ENST00000521434 OR10T2Q8NGX3 314 aa9.62□□□□□ -0.87
MRPS28-207ENST00000521434 GIPC2Q8TF65 315 aa9.62□□□□□ -0.87
MRPS28-207ENST00000521434 C2orf15Q8WU43 125 aaKnown RBP9.62□□□□□ -0.87
MRPS28-207ENST00000521434 MRPS31Q92665 395 aaKnown RBP9.62□□□□□ -0.87
MRPS28-207ENST00000521434 ATP2A3Q93084 1043 aa9.62□□□□□ -0.87
MRPS28-207ENST00000521434 DRC1Q96MC2 740 aa9.62□□□□□ -0.87
MRPS28-207ENST00000521434 C17orf75Q9HAS0 396 aa9.62□□□□□ -0.87
MRPS28-207ENST00000521434 DUS2Q9NX74 493 aaKnown RBP9.62□□□□□ -0.87
MRPS28-207ENST00000521434 PCDH15Q96QU1 1955 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 TENM4Q6N022 2769 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 SLC16A4O15374 487 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 CLDN3O15551 220 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 EPB41L2O43491 1005 aaKnown RBP9.61□□□□□ -0.87
MRPS28-207ENST00000521434 HIP1RO75146 1068 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 ALDH1A2O94788 518 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 CYP11A1P05108 521 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 CLTAP09496 248 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 OR52Z1P0C646 297 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 HAPLN1P10915 354 aaPredicted RBP9.61□□□□□ -0.87
MRPS28-207ENST00000521434 FDPSP14324 419 aaKnown RBP9.61□□□□□ -0.87
MRPS28-207ENST00000521434 PAX3P23760 479 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 CCT6AP40227 531 aaKnown RBP9.61□□□□□ -0.87
MRPS28-207ENST00000521434 P2RY2P41231 377 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 DPP6P42658 865 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 FOSBP53539 338 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 ATXN3P54252 364 aaPredicted RBP9.61□□□□□ -0.87
MRPS28-207ENST00000521434 PPP2R3AQ06190 1150 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 MCL1Q07820 350 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 SCAPQ12770 1279 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 SMARCB1Q12824 385 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 COL28A1Q2UY09 1125 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 C2orf27AQ580R0 203 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 LMBRD2Q68DH5 695 aaPredicted RBP9.61□□□□□ -0.87
MRPS28-207ENST00000521434 ZPBP2Q6X784 338 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 RAB44Q7Z6P3 723 aaPredicted RBP9.61□□□□□ -0.87
MRPS28-207ENST00000521434 MON1AQ86VX9 555 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 OLIG1Q8TAK6 271 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 SPPL2BQ8TCT7 592 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 USP33Q8TEY7 942 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 OSCP1Q8WVF1 389 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 SPACA7Q96KW9 195 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 SENP8Q96LD8 212 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 YTHDC1Q96MU7 727 aaKnown RBP9.61□□□□□ -0.87
MRPS28-207ENST00000521434 ZCWPW1Q9H0M4 648 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 TMEM74BQ9NUR3 256 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 DDX19AQ9NUU7 478 aaKnown RBP9.61□□□□□ -0.87
MRPS28-207ENST00000521434 MMP17Q9ULZ9 603 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 KIAA1024Q9UPX6 916 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 CFAP46Q8IYW2 2715 aa9.61□□□□□ -0.87
MRPS28-207ENST00000521434 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 LACTBL1A8MY62 500 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 PPEF2O14830 753 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 CFIP05156 583 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 HMGA1P17096 107 aaKnown RBP9.6□□□□□ -0.87
MRPS28-207ENST00000521434 HOXD12P35452 270 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 PTGER3P43115 390 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 MATR3P43243 847 aaKnown RBP eCLIP9.6□□□□□ -0.876e-6■■■■□ 21.9
MRPS28-207ENST00000521434 IFNAR2P48551 515 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 GUCY2FP51841 1108 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 CDR1P51861 262 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 SEC13P55735 322 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 FAM193AP78312 1265 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 FAM160A1Q05DH4 1040 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 NR1H3Q13133 447 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 MAPK7Q13164 816 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 HNRNPDQ14103 355 aaKnown RBP9.6□□□□□ -0.87
MRPS28-207ENST00000521434 TRIM29Q14134 588 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 NBR1Q14596 966 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 ZNF77Q15935 545 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 CRY1Q16526 586 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 KYAT1Q16773 422 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 EML3Q32P44 896 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 SPDYCQ5MJ68 293 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 ARMCX6Q7L4S7 300 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 TTC30AQ86WT1 665 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 TMEFF1Q8IYR6 380 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 ZNF454Q8N9F8 522 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 WHAMMQ8TF30 809 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 RLN3Q8WXF3 142 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 FNBP1Q96RU3 617 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 TSPAN18Q96SJ8 248 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 NTPCRQ9BSD7 190 aaKnown RBP9.6□□□□□ -0.87
MRPS28-207ENST00000521434 ABI2Q9NYB9 513 aaPredicted RBP9.6□□□□□ -0.87
MRPS28-207ENST00000521434 MBD1Q9UIS9 605 aaPredicted RBP9.6□□□□□ -0.87
MRPS28-207ENST00000521434 DSEQ9UL01 958 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 WNT6Q9Y6F9 365 aa9.6□□□□□ -0.87
MRPS28-207ENST00000521434 EIF4E1BA6NMX2 242 aaKnown RBP9.59□□□□□ -0.87
MRPS28-207ENST00000521434 K7EQS6 105 aa9.59□□□□□ -0.87
MRPS28-207ENST00000521434 OPHN1O60890 802 aa9.59□□□□□ -0.87
MRPS28-207ENST00000521434 ZIC2O95409 532 aaPredicted RBP9.59□□□□□ -0.87
MRPS28-207ENST00000521434 CSH1P0DML2 217 aa9.59□□□□□ -0.87
MRPS28-207ENST00000521434 CSH2P0DML3 217 aa9.59□□□□□ -0.87
MRPS28-207ENST00000521434 TNFSF9P41273 254 aa9.59□□□□□ -0.87
MRPS28-207ENST00000521434 MLLT3P42568 568 aaPredicted RBP9.59□□□□□ -0.87
MRPS28-207ENST00000521434 GFPT1Q06210 699 aaPredicted RBP9.59□□□□□ -0.87
MRPS28-207ENST00000521434 USP4Q13107 963 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms