RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 WARSP23381 471 aaKnown RBP11.5□□□□□ -0.57
PVT1-209ENST00000520913 CMA1P23946 247 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 CYP2F1P24903 491 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 AVPR1AP37288 418 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 GPR15P49685 360 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 NLRP12P59046 1061 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 TNNC1P63316 161 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 PSMD2Q13200 908 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 MAPRE1Q15691 268 aaKnown RBP11.5□□□□□ -0.57
PVT1-209ENST00000520913 SCARA3Q6AZY7 606 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 LIMS2Q7Z4I7 341 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 MAML2Q8IZL2 1156 aaPredicted RBP11.5□□□□□ -0.57
PVT1-209ENST00000520913 CELF5Q8N6W0 485 aaKnown RBP11.5□□□□□ -0.57
PVT1-209ENST00000520913 KIAA0895Q8NCT3 520 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 STKLD1Q8NE28 680 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 MRPS31Q92665 395 aaKnown RBP11.5□□□□□ -0.57
PVT1-209ENST00000520913 MMS19Q96T76 1030 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 CHRDQ9H2X0 955 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 C8orf33Q9H7E9 229 aaPredicted RBP11.5□□□□□ -0.57
PVT1-209ENST00000520913 PRMT8Q9NR22 394 aaPredicted RBP11.5□□□□□ -0.57
PVT1-209ENST00000520913 MAGED2Q9UNF1 606 aaPredicted RBP11.5□□□□□ -0.57
PVT1-209ENST00000520913 HPSEQ9Y251 543 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 EML5Q05BV3 1969 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 SPTBN4Q9H254 2564 aa11.5□□□□□ -0.57
PVT1-209ENST00000520913 RIF1Q5UIP0 2472 aaKnown RBP11.49□□□□□ -0.57
PVT1-209ENST00000520913 DCHS1Q96JQ0 3298 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 SOBPA7XYQ1 873 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 HCRTO43612 131 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 KINO60870 393 aaKnown RBP11.49□□□□□ -0.57
PVT1-209ENST00000520913 TADA3O75528 432 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 STAU1O95793 577 aaKnown RBP11.49□□□□□ -0.57
PVT1-209ENST00000520913 F11P03951 625 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 CCNE1P24864 410 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 MAGEA11P43364 429 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 KPNA1P52294 538 aaPredicted RBP11.49□□□□□ -0.57
PVT1-209ENST00000520913 PSMC1P62191 440 aaKnown RBP11.49□□□□□ -0.57
PVT1-209ENST00000520913 LRRC32Q14392 662 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 PPP2R5DQ14738 602 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 DDR2Q16832 855 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 CCDC142Q17RM4 750 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 KMT5BQ4FZB7 885 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 FAM171BQ6P995 826 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 TMEM150AQ86TG1 271 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 RALGPS2Q86X27 583 aaPredicted RBP11.49□□□□□ -0.57
PVT1-209ENST00000520913 CMTM8Q8IZV2 173 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 ADSSL1Q8N142 457 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 ZNF687Q8N1G0 1237 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 MYLPFQ96A32 169 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 SYAP1Q96A49 352 aaPredicted RBP11.49□□□□□ -0.57
PVT1-209ENST00000520913 CCDC127Q96BQ5 260 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 PAGE5Q96GU1 130 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 CEP295NLQ96MC4 621 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 THG1LQ9NWX6 298 aaKnown RBP11.49□□□□□ -0.57
PVT1-209ENST00000520913 PCDHGA2Q9Y5H1 932 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 GVINP1Q7Z2Y8 2422 aa11.49□□□□□ -0.57
PVT1-209ENST00000520913 RALGAPA1Q6GYQ0 2036 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 MYBPHLA2RUH7 354 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 SPECC1L-ADORA2AF8WAN1 911 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 TACC1O75410 805 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 CLSTN1O94985 981 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 KIF20AO95235 890 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 ATICP31939 592 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 CTHP32929 405 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 SYKP43405 635 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 AP3M2P53677 418 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 CSTF1Q05048 431 aaKnown RBP11.48□□□□□ -0.57
PVT1-209ENST00000520913 STK4Q13043 487 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 FZD5Q13467 585 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 TRPC3Q13507 836 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 SDHAF4Q5VUM1 108 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 VSTM1Q6UX27 236 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 SLC9A9Q8IVB4 645 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 SCN4BQ8IWT1 228 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 MAB21L3Q8N8X9 362 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 FSIP1Q8NA03 581 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 CCDC47Q96A33 483 aaKnown RBP11.48□□□□□ -0.57
PVT1-209ENST00000520913 ZFYVE19Q96K21 471 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 MYRFLQ96LU7 910 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 SLC46A2Q9BY10 475 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 SCAND2PQ9GZW5 306 aaPredicted RBP11.48□□□□□ -0.57
PVT1-209ENST00000520913 GZF1Q9H116 711 aaPredicted RBP11.48□□□□□ -0.57
PVT1-209ENST00000520913 SNX25Q9H3E2 840 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 CRTAC1Q9NQ79 661 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 TDP1Q9NUW8 608 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 MAGEC2Q9UBF1 373 aaPredicted RBP11.48□□□□□ -0.57
PVT1-209ENST00000520913 ZDHHC9Q9Y397 364 aa11.48□□□□□ -0.57
PVT1-209ENST00000520913 FAM237AA0A1B0GTK4 181 aa11.47□□□□□ -0.57
PVT1-209ENST00000520913 LRRIQ3A6PVS8 624 aaPredicted RBP11.47□□□□□ -0.57
PVT1-209ENST00000520913 PDXKO00764 312 aa11.47□□□□□ -0.57
PVT1-209ENST00000520913 TRIM66O15016 1216 aa11.47□□□□□ -0.57
PVT1-209ENST00000520913 PHACTR2O75167 634 aa11.47□□□□□ -0.57
PVT1-209ENST00000520913 ATP2C2O75185 946 aa11.47□□□□□ -0.57
PVT1-209ENST00000520913 CST3P01034 146 aaPredicted RBP11.47□□□□□ -0.57
PVT1-209ENST00000520913 RPN1P04843 607 aaKnown RBP11.47□□□□□ -0.57
PVT1-209ENST00000520913 LMO2P25791 158 aa11.47□□□□□ -0.57
PVT1-209ENST00000520913 ANXA13P27216 316 aa11.47□□□□□ -0.57
PVT1-209ENST00000520913 SOX9P48436 509 aa11.47□□□□□ -0.57
PVT1-209ENST00000520913 CCR3P51677 355 aa11.47□□□□□ -0.57
PVT1-209ENST00000520913 CYP27A1Q02318 531 aa11.47□□□□□ -0.57
PVT1-209ENST00000520913 USP4Q13107 963 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms