RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 UXTQ9UBK9 157 aaPredicted RBP21.08■□□□□ 0.97
PABPC1-215ENST00000520804 R3HCC1Q9Y3T6 440 aaKnown RBP21.08■□□□□ 0.97
PABPC1-215ENST00000520804 DNAH14Q0VDD8 3507 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 K7ESF4 209 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 EIF3DO15371 548 aaKnown RBP eCLIP21.07■□□□□ 0.96
PABPC1-215ENST00000520804 HCRTO43612 131 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 CUTAO60888 179 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 TNNC2P02585 160 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 ASIC1P78348 528 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 CCDC142Q17RM4 750 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 DUOXA2Q1HG44 320 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 SHC4Q6S5L8 630 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 EPM2AIP1Q7L775 607 aaPredicted RBP21.07■□□□□ 0.96
PABPC1-215ENST00000520804 DGLUCYQ7Z3D6 616 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 LIMS2Q7Z4I7 341 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 SPATA2LQ8IUW3 424 aaPredicted RBP21.07■□□□□ 0.96
PABPC1-215ENST00000520804 SYNPOQ8N3V7 929 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 IQUBQ8NA54 791 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 ZNF507Q8TCN5 953 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 TRMT2BQ96GJ1 504 aaKnown RBP21.07■□□□□ 0.96
PABPC1-215ENST00000520804 FUBP3Q96I24 572 aaKnown RBP eCLIP21.07■□□□□ 0.96
PABPC1-215ENST00000520804 HPDLQ96IR7 371 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 MYRFLQ96LU7 910 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 KIAA1586Q9HCI6 787 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 HPS4Q9NQG7 708 aa21.07■□□□□ 0.96
PABPC1-215ENST00000520804 TADA3O75528 432 aa21.06■□□□□ 0.96
PABPC1-215ENST00000520804 DMWDQ09019 674 aa21.06■□□□□ 0.96
PABPC1-215ENST00000520804 RUNX3Q13761 415 aa21.06■□□□□ 0.96
PABPC1-215ENST00000520804 ZNF268Q14587 947 aaPredicted RBP21.06■□□□□ 0.96
PABPC1-215ENST00000520804 FAM171BQ6P995 826 aa21.06■□□□□ 0.96
PABPC1-215ENST00000520804 WDR49Q8IV35 697 aa21.06■□□□□ 0.96
PABPC1-215ENST00000520804 C7orf25Q9BPX7 421 aa21.06■□□□□ 0.96
PABPC1-215ENST00000520804 GMEB2Q9UKD1 530 aa21.06■□□□□ 0.96
PABPC1-215ENST00000520804 RAB23Q9ULC3 237 aa21.06■□□□□ 0.96
PABPC1-215ENST00000520804 ZNF638Q14966 1978 aaKnown RBP21.05■□□□□ 0.96
PABPC1-215ENST00000520804 CHURC1-FNTBB4DL54 471 aa21.05■□□□□ 0.96
PABPC1-215ENST00000520804 TGFB1I1O43294 461 aa21.05■□□□□ 0.96
PABPC1-215ENST00000520804 TGM1P22735 817 aa21.05■□□□□ 0.96
PABPC1-215ENST00000520804 FNTBP49356 437 aa21.05■□□□□ 0.96
PABPC1-215ENST00000520804 RSPO4Q2I0M5 234 aaPredicted RBP21.05■□□□□ 0.96
PABPC1-215ENST00000520804 FAM26FQ5R3K3 315 aa21.05■□□□□ 0.96
PABPC1-215ENST00000520804 TRIM68Q6AZZ1 485 aa21.05■□□□□ 0.96
PABPC1-215ENST00000520804 RIN3Q8TB24 985 aa21.05■□□□□ 0.96
PABPC1-215ENST00000520804 KBTBD7Q8WVZ9 684 aa21.05■□□□□ 0.96
PABPC1-215ENST00000520804 SNX21Q969T3 373 aa21.05■□□□□ 0.96
PABPC1-215ENST00000520804 EBF3Q9H4W6 596 aa21.05■□□□□ 0.96
PABPC1-215ENST00000520804 C2orf42Q9NWW7 574 aa21.05■□□□□ 0.96
PABPC1-215ENST00000520804 OTOL1A6NHN0 477 aaPredicted RBP21.04■□□□□ 0.96
PABPC1-215ENST00000520804 ATP2C2O75185 946 aa21.04■□□□□ 0.96
PABPC1-215ENST00000520804 LMO2P25791 158 aa21.04■□□□□ 0.96
PABPC1-215ENST00000520804 MAGEA11P43364 429 aa21.04■□□□□ 0.96
PABPC1-215ENST00000520804 LPAL2Q16609 132 aa21.04■□□□□ 0.96
PABPC1-215ENST00000520804 LAIR1Q6GTX8 287 aa21.04■□□□□ 0.96
PABPC1-215ENST00000520804 C4orf50Q6ZRC1 276 aa21.04■□□□□ 0.96
PABPC1-215ENST00000520804 LONP2Q86WA8 852 aa21.04■□□□□ 0.96
PABPC1-215ENST00000520804 SCN4BQ8IWT1 228 aa21.04■□□□□ 0.96
PABPC1-215ENST00000520804 CHFRQ96EP1 664 aa21.04■□□□□ 0.96
PABPC1-215ENST00000520804 SYT15Q9BQS2 421 aa21.04■□□□□ 0.96
PABPC1-215ENST00000520804 MAGEF1Q9HAY2 307 aa21.04■□□□□ 0.96
PABPC1-215ENST00000520804 AGPAT3Q9NRZ7 376 aa21.04■□□□□ 0.96
PABPC1-215ENST00000520804 CDH9Q9ULB4 789 aa21.04■□□□□ 0.96
PABPC1-215ENST00000520804 UBE4BO95155 1302 aa21.04■□□□□ 0.96
PABPC1-215ENST00000520804 CACNA1AO00555 2505 aa21.03■□□□□ 0.96
PABPC1-215ENST00000520804 HRO43593 1189 aa21.03■□□□□ 0.96
PABPC1-215ENST00000520804 WARSP23381 471 aaKnown RBP21.03■□□□□ 0.96
PABPC1-215ENST00000520804 HOXA6P31267 233 aa21.03■□□□□ 0.96
PABPC1-215ENST00000520804 CNR2P34972 360 aa21.03■□□□□ 0.96
PABPC1-215ENST00000520804 LMNB2Q03252 620 aa21.03■□□□□ 0.96
PABPC1-215ENST00000520804 EHHADHQ08426 723 aa21.03■□□□□ 0.96
PABPC1-215ENST00000520804 SIM2Q14190 667 aaPredicted RBP21.03■□□□□ 0.96
PABPC1-215ENST00000520804 SNRNP35Q16560 246 aaKnown RBP21.03■□□□□ 0.96
PABPC1-215ENST00000520804 TMEM196Q5HYL7 178 aa21.03■□□□□ 0.96
PABPC1-215ENST00000520804 FOXD4L5Q5VV16 416 aaPredicted RBP21.03■□□□□ 0.96
PABPC1-215ENST00000520804 CC2D1AQ6P1N0 951 aaPredicted RBP21.03■□□□□ 0.96
PABPC1-215ENST00000520804 PRR23BQ6ZRT6 265 aa21.03■□□□□ 0.96
PABPC1-215ENST00000520804 UNC13DQ70J99 1090 aa21.03■□□□□ 0.96
PABPC1-215ENST00000520804 TRAPPC11Q7Z392 1133 aa21.03■□□□□ 0.96
PABPC1-215ENST00000520804 RDH13Q8NBN7 331 aa21.03■□□□□ 0.96
PABPC1-215ENST00000520804 SCFD1Q8WVM8 642 aa21.03■□□□□ 0.96
PABPC1-215ENST00000520804 FOXD4L4Q8WXT5 416 aaPredicted RBP21.03■□□□□ 0.96
PABPC1-215ENST00000520804 PARD6AQ9NPB6 346 aa21.03■□□□□ 0.96
PABPC1-215ENST00000520804 MAGEC2Q9UBF1 373 aaPredicted RBP21.03■□□□□ 0.96
PABPC1-215ENST00000520804 USP18Q9UMW8 372 aa21.03■□□□□ 0.96
PABPC1-215ENST00000520804 TRDMT1O14717 391 aaKnown RBP21.02■□□□□ 0.96
PABPC1-215ENST00000520804 POLR2DO15514 142 aaKnown RBP21.02■□□□□ 0.96
PABPC1-215ENST00000520804 PDIA4P13667 645 aaKnown RBP21.02■□□□□ 0.96
PABPC1-215ENST00000520804 ARSAP15289 507 aa21.02■□□□□ 0.96
PABPC1-215ENST00000520804 SDHBP21912 280 aa21.02■□□□□ 0.96
PABPC1-215ENST00000520804 PSMC1P62191 440 aaKnown RBP21.02■□□□□ 0.96
PABPC1-215ENST00000520804 SNRPFP62306 86 aaKnown RBP21.02■□□□□ 0.96
PABPC1-215ENST00000520804 AMPD2Q01433 879 aa21.02■□□□□ 0.96
PABPC1-215ENST00000520804 FAM160A1Q05DH4 1040 aa21.02■□□□□ 0.96
PABPC1-215ENST00000520804 GRSF1Q12849 480 aaKnown RBP eCLIP21.02■□□□□ 0.96
PABPC1-215ENST00000520804 MTF1Q14872 753 aa21.02■□□□□ 0.96
PABPC1-215ENST00000520804 PSMD6Q15008 389 aa21.02■□□□□ 0.96
PABPC1-215ENST00000520804 PDGFRLQ15198 375 aa21.02■□□□□ 0.96
PABPC1-215ENST00000520804 MAPRE1Q15691 268 aaKnown RBP21.02■□□□□ 0.96
PABPC1-215ENST00000520804 FSTL4Q6MZW2 842 aa21.02■□□□□ 0.96
PABPC1-215ENST00000520804 VSTM1Q6UX27 236 aa21.02■□□□□ 0.96
PABPC1-215ENST00000520804 MYLPFQ96A32 169 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms