RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 HEXIM2Q96MH2 286 aaKnown RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 ZNF518BQ9C0D4 1074 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 LHX5Q9H2C1 402 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 DDX43Q9NXZ2 648 aaKnown RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 CXXC1Q9P0U4 656 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 PUF60Q9UHX1 559 aaKnown RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 SALL4Q9UJQ4 1053 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 GTF3C4Q9UKN8 822 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 FAN1Q9Y2M0 1017 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 PRG3Q9Y2Y8 225 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 TIMM13Q9Y5L4 95 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 DUSP10Q9Y6W6 482 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 SF3B1O75533 1304 aaKnown RBP eCLIP9.04□□□□□ -0.968e-6■■■■■ 107
VAPB-206ENST00000520497 DOCK6Q96HP0 2047 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 CARNS1A5YM72 827 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 TMCO5BA8MYB1 307 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 DLL1O00548 723 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 MAP3K13O43283 966 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 TRAPPC3O43617 180 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 MICAL2O94851 1124 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 OAZ2O95190 189 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 ALDH2P05091 517 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 PDGFRBP09619 1106 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 LINC00271P0C7V0 271 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 FGFR3P22607 806 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 PCSK1P29120 753 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 TKTP29401 623 aaKnown RBP9.03□□□□□ -0.96
VAPB-206ENST00000520497 SSTR3P32745 418 aaPredicted RBP9.03□□□□□ -0.96
VAPB-206ENST00000520497 PBX3P40426 434 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 GPD2P43304 727 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 NSFP46459 744 aaKnown RBP9.03□□□□□ -0.96
VAPB-206ENST00000520497 HADHBP55084 474 aaKnown RBP9.03□□□□□ -0.96
VAPB-206ENST00000520497 TUBB4BP68371 445 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 TCEAL1Q15170 157 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 CCDC142Q17RM4 750 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 RASIP1Q5U651 963 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 OVOS1Q6IE37 1185 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 DENND1BQ6P3S1 775 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 FUT10Q6P4F1 479 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 TTC30AQ86WT1 665 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 PASD1Q8IV76 773 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 MCOLN2Q8IZK6 566 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 TMEM35BQ8NCS4 154 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 C1orf131Q8NDD1 294 aaKnown RBP9.03□□□□□ -0.96
VAPB-206ENST00000520497 MNS1Q8NEH6 495 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 MYRIPQ8NFW9 859 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 UBE2Q2Q8WVN8 375 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 CPA5Q8WXQ8 436 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 RFFLQ8WZ73 363 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 ARHGEF26Q96DR7 871 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 TRIM11Q96F44 468 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 VCPIP1Q96JH7 1222 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 SLC9A7Q96T83 725 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 PKMYT1Q99640 499 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 LBHD1Q9BQE6 289 aaPredicted RBP9.03□□□□□ -0.96
VAPB-206ENST00000520497 LPIN3Q9BQK8 851 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 SYT15Q9BQS2 421 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 ACBD6Q9BR61 282 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 COLEC11Q9BWP8 271 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 IRX2Q9BZI1 471 aaPredicted RBP9.03□□□□□ -0.96
VAPB-206ENST00000520497 GPR62Q9BZJ7 368 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 THAP2Q9H0W7 228 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 PDCL3Q9H2J4 239 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 CRTAC1Q9NQ79 661 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 FAM49BQ9NUQ9 324 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 CYTH4Q9UIA0 394 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 TSPAN16Q9UKR8 245 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 CDH9Q9ULB4 789 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 COL6A3P12111 3177 aa9.03□□□□□ -0.96
VAPB-206ENST00000520497 MACROD2A1Z1Q3 448 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 ZBBXA8MT70 800 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 NT5C1B-RDH14C9J2C7 533 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 M0QYV0 167 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 FANCGO15287 622 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 ATP2C2O75185 946 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 TADA2AO75478 443 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 MTA2O94776 668 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 SLU7O95391 586 aaKnown RBP9.02□□□□□ -0.97
VAPB-206ENST00000520497 CYP1A2P05177 515 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 SETSIPP0DME0 302 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 MYBL1P10243 752 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 CCDC130P13994 396 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 PTPN1P18031 435 aaKnown RBP9.02□□□□□ -0.97
VAPB-206ENST00000520497 ABCB4P21439 1286 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 MMP8P22894 467 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 ACAT1P24752 427 aaKnown RBP9.02□□□□□ -0.97
VAPB-206ENST00000520497 RPL34P49207 117 aaKnown RBP9.02□□□□□ -0.97
VAPB-206ENST00000520497 ALDH7A1P49419 539 aaKnown RBP9.02□□□□□ -0.97
VAPB-206ENST00000520497 BCAT1P54687 386 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 GSCP56915 257 aaPredicted RBP9.02□□□□□ -0.97
VAPB-206ENST00000520497 PSMC1P62191 440 aaKnown RBP9.02□□□□□ -0.97
VAPB-206ENST00000520497 GPC5P78333 572 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 PLCB3Q01970 1234 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 YWHAHQ04917 246 aaPredicted RBP9.02□□□□□ -0.97
VAPB-206ENST00000520497 CKAP4Q07065 602 aaKnown RBP9.02□□□□□ -0.97
VAPB-206ENST00000520497 ELAVL2Q12926 359 aaKnown RBP9.02□□□□□ -0.97
VAPB-206ENST00000520497 MRPL58Q14197 206 aaKnown RBP9.02□□□□□ -0.97
VAPB-206ENST00000520497 BTG3Q14201 252 aaPredicted RBP9.02□□□□□ -0.97
VAPB-206ENST00000520497 GOLGA7BQ2TAP0 167 aa9.02□□□□□ -0.97
VAPB-206ENST00000520497 PTPN20Q4JDL3 420 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms