RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 CRYBB1P53674 252 aaPredicted RBP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 ZBED6P86452 979 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 MYL7Q01449 175 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 PTPN11Q06124 597 aaPredicted RBP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 ITGA7Q13683 1181 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 NOLC1Q14978 699 aaKnown RBP eCLIP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 SNX17Q15036 470 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 EXOC3L4Q17RC7 722 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 EPC2Q52LR7 807 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 SEZ6Q53EL9 994 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 KLHDC7AQ5VTJ3 777 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 WDR59Q6PJI9 974 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 CDR2LQ86X02 465 aaPredicted RBP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 CNGA4Q8IV77 575 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 FBXL6Q8N531 539 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 SLC43A3Q8NBI5 491 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 ARRDC4Q8NCT1 418 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 CCDC112Q8NEF3 446 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 NEK11Q8NG66 645 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 OR8K1Q8NGG5 319 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 CPB2Q96IY4 423 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 BAG1Q99933 345 aaPredicted RBP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 TCHPQ9BT92 498 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 NAA15Q9BXJ9 866 aaKnown RBP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 CELF4Q9BZC1 486 aaKnown RBP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 CDT1Q9H211 546 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 GSX1Q9H4S2 264 aaPredicted RBP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 PDE11AQ9HCR9 933 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 TOPORSQ9NS56 1045 aaPredicted RBP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 ABHD10Q9NUJ1 306 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 DCTN4Q9UJW0 460 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 CPSF3Q9UKF6 684 aaKnown RBP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 LUC7L2Q9Y383 392 aaKnown RBP8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 COQ4Q9Y3A0 265 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 PTPRJQ12913 1337 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 DNAH12Q6ZR08 3092 aa8.48□□□□□ -1.05
CTHRC1-203ENST00000520337 TET1Q8NFU7 2136 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 A0A1W2PQ45 241 aaPredicted RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 A0A1W2PQY0 241 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 STX10O60499 249 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 N4BP1O75113 896 aaKnown RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 LRRN2O75325 713 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 C4BPAP04003 597 aaKnown RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 TPM1P09493 284 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 MCF2P10911 925 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 HSPA8P11142 646 aaKnown RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 HARSP12081 509 aaKnown RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 CCL5P13501 91 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 HNRNPH3P31942 346 aaKnown RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 MATR3P43243 847 aaKnown RBP eCLIP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 IRAK1P51617 712 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 POLR2FP61218 127 aaKnown RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 MRPS6P82932 125 aaKnown RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 MGAT3Q09327 533 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 PCBP1Q15365 356 aaKnown RBP eCLIP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 ENOX2Q16206 610 aaKnown RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 MEA1Q16626 185 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 PTGISQ16647 500 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 TRIM71Q2Q1W2 868 aaKnown RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 ZNF568Q3ZCX4 644 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 FAM47CQ5HY64 1035 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 E4F1Q66K89 784 aaPredicted RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 GJB7Q6PEY0 223 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 TRIM65Q6PJ69 517 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 ZAR1Q86SH2 424 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 BRSK2Q8IWQ3 736 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 TMEM192Q8IY95 271 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 DHX38Q92620 1227 aaKnown RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 SEMA4DQ92854 862 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 FAM84AQ96KN4 292 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 SCLT1Q96NL6 688 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 CHP1Q99653 195 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 INTS2Q9H0H0 1204 aaKnown RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 TMEM8AQ9HCN3 771 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 TRMT13Q9NUP7 481 aaKnown RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 RBAKQ9NYW8 714 aaPredicted RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 GCNT4Q9P109 453 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 CEP72Q9P209 647 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 PRKAG2Q9UGJ0 569 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 FBXL5Q9UKA1 691 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 AJAP1Q9UKB5 411 aaPredicted RBP8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 GINS2Q9Y248 185 aa8.47□□□□□ -1.05
CTHRC1-203ENST00000520337 ERLIN2O94905 339 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 VNN1O95497 513 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 CLTAP09496 248 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 DLATP10515 647 aaKnown RBP8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 UCHL3P15374 230 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 KCNJ6P48051 423 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 MXI1P50539 228 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 CDK7P50613 346 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 JAM2P57087 298 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 CDK17Q00537 523 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 POU5F1Q01860 360 aaKnown RBP8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 GRM2Q14416 872 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 SLC10A6Q3KNW5 377 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 ZACNQ401N2 412 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 SLC9C1Q4G0N8 1177 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 UBXN11Q5T124 520 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 TMCO4Q5TGY1 634 aa8.46□□□□□ -1.06
CTHRC1-203ENST00000520337 KRT39Q6A163 491 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms