RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 ANKRD54Q6NXT1 300 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 LLGL2Q6P1M3 1020 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 CRELD2Q6UXH1 353 aaPredicted RBP6□□□□□ -1.45
CTNNA1-220ENST00000520260 MTSS1LQ765P7 747 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 PDZD4Q76G19 769 aaPredicted RBP6□□□□□ -1.45
CTNNA1-220ENST00000520260 SV2AQ7L0J3 742 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 SRLQ86TD4 932 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 PHF6Q8IWS0 365 aaKnown RBP eCLIP6□□□□□ -1.45
CTNNA1-220ENST00000520260 TCEAL8Q8IYN2 117 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 SMYD4Q8IYR2 804 aaPredicted RBP6□□□□□ -1.45
CTNNA1-220ENST00000520260 RNF168Q8IYW5 571 aaPredicted RBP6□□□□□ -1.45
CTNNA1-220ENST00000520260 C1orf127Q8N9H9 656 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 TDRD5Q8NAT2 981 aaKnown RBP6□□□□□ -1.45
CTNNA1-220ENST00000520260 STKLD1Q8NE28 680 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 PDZD8Q8NEN9 1154 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 NEK11Q8NG66 645 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 CNOT6LQ96LI5 555 aaKnown RBP6□□□□□ -1.45
CTNNA1-220ENST00000520260 PCMTD1Q96MG8 357 aaPredicted RBP6□□□□□ -1.45
CTNNA1-220ENST00000520260 ZMAT2Q96NC0 199 aaKnown RBP6□□□□□ -1.45
CTNNA1-220ENST00000520260 MED10Q9BTT4 135 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 TUBB2BQ9BVA1 445 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 CARD6Q9BX69 1037 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 NT5C1AQ9BXI3 368 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 GPR62Q9BZJ7 368 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 ADAM7Q9H2U9 754 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 MMRN2Q9H8L6 949 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 CYP4F11Q9HBI6 524 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 GOLGA2P5Q9HBQ8 144 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 ARFGAP3Q9NP61 516 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 MAN1C1Q9NR34 630 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 GEMIN8Q9NWZ8 242 aaKnown RBP6□□□□□ -1.45
CTNNA1-220ENST00000520260 COMMD8Q9NX08 183 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 DDX43Q9NXZ2 648 aaKnown RBP6□□□□□ -1.45
CTNNA1-220ENST00000520260 IFNKQ9P0W0 207 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 NXF1Q9UBU9 619 aaKnown RBP6□□□□□ -1.45
CTNNA1-220ENST00000520260 USTQ9Y2C2 406 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 USP20Q9Y2K6 914 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 HCFC2Q9Y5Z7 792 aa6□□□□□ -1.45
CTNNA1-220ENST00000520260 GBF1Q92538 1859 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 COL4A4P53420 1690 aaPredicted RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 KCNJ18B7U540 433 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 PPP1R3GB7ZBB8 358 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 TISP43B9A030 160 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 POLR3GO15318 223 aaPredicted RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 SART1O43290 800 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 TGM5O43548 720 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 CLASP2O75122 1294 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 ZMYND10O75800 440 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 MICAL2O94851 1124 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 RTN3O95197 1032 aaPredicted RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 ASS1P00966 412 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 SERPINC1P01008 464 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 HLA-DRAP01903 254 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 TUBBP07437 444 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 CSH1P0DML2 217 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 CSH2P0DML3 217 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 PTPN2P17706 415 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 SSTR3P32745 418 aaPredicted RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 MAGEA11P43364 429 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 GCLMP48507 274 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 FMO5P49326 533 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 ERVFC1P60507 584 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 FANCCQ00597 558 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 AMPD2Q01433 879 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 ROR1Q01973 937 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 GCNT1Q02742 428 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 HYAL1Q12794 435 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 ADAM15Q13444 863 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 KCNJ12Q14500 433 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 CBX2Q14781 532 aaPredicted RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 EXOC3L4Q17RC7 722 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 TSR1Q2NL82 804 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 MGAT5BQ3V5L5 792 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 CFAP221Q4G0U5 840 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 SLC39A12Q504Y0 691 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 INTS6LQ5JSJ4 861 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 RTP2Q5QGT7 225 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 ZBTB41Q5SVQ8 909 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 ICE2Q659A1 982 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 ISM2Q6H9L7 571 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 PTCRAQ6ISU1 281 aaPredicted RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 TTI2Q6NXR4 508 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 C1orf228Q6PIY5 440 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 VPS36Q86VN1 386 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 VSTM4Q8IW00 320 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 ZC3H3Q8IXZ2 948 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 EFCAB13Q8IY85 973 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 ARHGAP18Q8N392 663 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 GOLGA6L1Q8N7Z2 621 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 SMRP1Q8NCR6 262 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 LNX1Q8TBB1 728 aaPredicted RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 SLC7A14Q8TBB6 771 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 SMG7Q92540 1137 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 SMARCD1Q96GM5 515 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 SLITRK1Q96PX8 696 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 ASB2Q96Q27 587 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 SEPT5Q99719 369 aaPredicted RBP5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 SYT15Q9BQS2 421 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 FUT8Q9BYC5 575 aa5.99□□□□□ -1.45
CTNNA1-220ENST00000520260 PRKD2Q9BZL6 878 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms