RNA–Protein interactions for RNA: ENST00000520109.1

TNFRSF10B-206, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 674 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-206ENST00000520109 TRAPPC11Q7Z392 1133 aa20.52■□□□□ 0.88
TNFRSF10B-206ENST00000520109 MON1AQ86VX9 555 aa20.52■□□□□ 0.88
TNFRSF10B-206ENST00000520109 MAB21L3Q8N8X9 362 aa20.52■□□□□ 0.88
TNFRSF10B-206ENST00000520109 RDH13Q8NBN7 331 aa20.52■□□□□ 0.88
TNFRSF10B-206ENST00000520109 ZSWIM2Q8NEG5 633 aa20.52■□□□□ 0.88
TNFRSF10B-206ENST00000520109 CCDC26Q8TAB7 109 aa20.52■□□□□ 0.88
TNFRSF10B-206ENST00000520109 CXorf38Q8TB03 319 aa20.52■□□□□ 0.88
TNFRSF10B-206ENST00000520109 SYAP1Q96A49 352 aaPredicted RBP20.52■□□□□ 0.88
TNFRSF10B-206ENST00000520109 SLC46A2Q9BY10 475 aa20.52■□□□□ 0.88
TNFRSF10B-206ENST00000520109 EXOC1Q9NV70 894 aa20.52■□□□□ 0.88
TNFRSF10B-206ENST00000520109 SCN1AP35498 2009 aa20.52■□□□□ 0.88
TNFRSF10B-206ENST00000520109 TRAV19A0A0A6YYK7 116 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 ATG13O75143 517 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 PHACTR2O75167 634 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 CLSTN1O94985 981 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 F11P03951 625 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 USP17L7P0C7H9 530 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 CHRNB1P11230 501 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 HMGA1P17096 107 aaKnown RBP20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 WARSP23381 471 aaKnown RBP20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 CYP2F1P24903 491 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 CNR2P34972 360 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 KRT85P78386 507 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 CYP24A1Q07973 514 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 FZD5Q13467 585 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 PDGFRLQ15198 375 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 SCN4BQ8IWT1 228 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 NELFCDQ8IXH7 590 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 SCFD1Q8WVM8 642 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 NELL1Q92832 810 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 HPS3Q969F9 1004 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 EPC1Q9H2F5 836 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 GMEB2Q9UKD1 530 aa20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 NUP210Q8TEM1 1887 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF10B-206ENST00000520109 NRG2O14511 850 aaPredicted RBP20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 TGFB1I1O43294 461 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 TACC1O75410 805 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 PRAMEF12O95522 483 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 STAU1O95793 577 aaKnown RBP20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 AFMP43652 599 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 FAM160A1Q05DH4 1040 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 EHHADHQ08426 723 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 GRSF1Q12849 480 aaKnown RBP eCLIP20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 KCNB1Q14721 858 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 DDR2Q16832 855 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 LMBRD2Q68DH5 695 aaPredicted RBP20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 FAM171BQ6P995 826 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 OR5B17Q8NGF7 314 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 CCDC127Q96BQ5 260 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 SPATA17Q96L03 361 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 SLC39A2Q9NP94 309 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 TMLHEQ9NVH6 421 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 GTSE1Q9NYZ3 720 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 RCOR1Q9UKL0 485 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 PATJQ8NI35 1801 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 ATP8B3O60423 1300 aa20.5■□□□□ 0.87
TNFRSF10B-206ENST00000520109 CLIC2O15247 247 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 LILRB5O75023 590 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 PAPSS2O95340 614 aaPredicted RBP20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 CKMP06732 381 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 P4HA1P13674 534 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 GNL1P36915 607 aaPredicted RBP20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 GRIK1P39086 918 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 CYP27A1Q02318 531 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 DNM1Q05193 864 aaKnown RBP20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 NR1H3Q13133 447 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 RUNX3Q13761 415 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 WDR72Q3MJ13 1102 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 ZNF687Q8N1G0 1237 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 CPA6Q8N4T0 437 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 SUMF1Q8NBK3 374 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 GLIS3Q8NEA6 775 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 OR6B3Q8NGW1 331 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 RSPRY1Q96DX4 576 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 SPATA32Q96LK8 384 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 PKMYT1Q99640 499 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 DNAI2Q9GZS0 605 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 BLZF1Q9H2G9 400 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 GKN1Q9NS71 199 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 USP34Q70CQ2 3546 aa20.49■□□□□ 0.87
TNFRSF10B-206ENST00000520109 SHISA7A6NL88 538 aa20.48■□□□□ 0.87
TNFRSF10B-206ENST00000520109 TXNDC8Q6A555 127 aa20.48■□□□□ 0.87
TNFRSF10B-206ENST00000520109 DENND5BQ6ZUT9 1274 aa20.48■□□□□ 0.87
TNFRSF10B-206ENST00000520109 LIMS2Q7Z4I7 341 aa20.48■□□□□ 0.87
TNFRSF10B-206ENST00000520109 MYCBPAPQ8TBZ2 947 aa20.48■□□□□ 0.87
TNFRSF10B-206ENST00000520109 ATP2A3Q93084 1043 aa20.48■□□□□ 0.87
TNFRSF10B-206ENST00000520109 ELOVL4Q9GZR5 314 aa20.48■□□□□ 0.87
TNFRSF10B-206ENST00000520109 TRPC7Q9HCX4 862 aa20.48■□□□□ 0.87
TNFRSF10B-206ENST00000520109 TRPM5Q9NZQ8 1165 aa20.48■□□□□ 0.87
TNFRSF10B-206ENST00000520109 SMG5Q9UPR3 1016 aaKnown RBP20.48■□□□□ 0.87
TNFRSF10B-206ENST00000520109 TICRRQ7Z2Z1 1910 aa20.48■□□□□ 0.87
TNFRSF10B-206ENST00000520109 CMA1P23946 247 aa20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 HOXD13P35453 343 aa20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 BIRC3Q13489 604 aa20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 CUL4BQ13620 913 aa20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 FBXO43Q4G163 708 aa20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 TMEM174Q8WUU8 243 aa20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 KBTBD7Q8WVZ9 684 aa20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 USP13Q92995 863 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF10B-206ENST00000520109 MYLPFQ96A32 169 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms