RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 CCDC78A2IDD5 438 aa9.05□□□□□ -0.96
CSMD1-206ENST00000520002 PHGDHO43175 533 aaKnown RBP9.05□□□□□ -0.96
CSMD1-206ENST00000520002 ARIH2O95376 493 aa9.05□□□□□ -0.96
CSMD1-206ENST00000520002 PTGS2P35354 604 aa9.05□□□□□ -0.96
CSMD1-206ENST00000520002 FXR1P51114 621 aaKnown RBP eCLIP9.05□□□□□ -0.96
CSMD1-206ENST00000520002 EPB41L4AQ9HCS5 686 aaPredicted RBP9.05□□□□□ -0.96
CSMD1-206ENST00000520002 MPP6Q9NZW5 540 aa9.05□□□□□ -0.96
CSMD1-206ENST00000520002 AGO2Q9UKV8 859 aaKnown RBP9.05□□□□□ -0.96
CSMD1-206ENST00000520002 TBC1D12O60347 775 aa9.05□□□□□ -0.96
CSMD1-206ENST00000520002 TPI1P60174 286 aa9.05□□□□□ -0.96
CSMD1-206ENST00000520002 KCNJ2P63252 427 aa9.05□□□□□ -0.96
CSMD1-206ENST00000520002 FASTKD5Q7L8L6 764 aaKnown RBP9.05□□□□□ -0.96
CSMD1-206ENST00000520002 UBE2Q1Q7Z7E8 422 aa9.05□□□□□ -0.96
CSMD1-206ENST00000520002 GPD1LQ8N335 351 aa9.05□□□□□ -0.96
CSMD1-206ENST00000520002 TTLL6Q8N841 843 aa9.05□□□□□ -0.96
CSMD1-206ENST00000520002 SUN5Q8TC36 379 aa9.05□□□□□ -0.96
CSMD1-206ENST00000520002 MYL2P10916 166 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 KCNJ6P48051 423 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 ITGA8P53708 1063 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 FRMD5Q7Z6J6 570 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 SLC35G2Q8TBE7 412 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 AGPAT5Q9NUQ2 364 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 ZNF335Q9H4Z2 1342 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 COL15A1P39059 1388 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 RAD51BO15315 384 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 PAX3P23760 479 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 SFNP31947 248 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 MYLK2Q9H1R3 596 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 CLEC4MQ9H2X3 399 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 MBD2Q9UBB5 411 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 GRAP2O75791 330 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 VIL1P09327 827 aaKnown RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 PSMB9P28065 219 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 FOXP4Q8IVH2 680 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 TRIM45Q9H8W5 580 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 ATF4P18848 351 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 TFE3P19532 575 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 PSMC5P62195 406 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 FCHO2Q0JRZ9 810 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 SLC29A2Q14542 456 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 DUOXA2Q1HG44 320 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 ZNF467Q7Z7K2 595 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 RTL3Q8N8U3 475 aaKnown RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 DMAP1Q9NPF5 467 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 IGKV5-2P06315 115 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 NDUFA5Q16718 116 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 AARS2Q5JTZ9 985 aaKnown RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 TRAPPC11Q7Z392 1133 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 NDNQ99608 321 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 ZC3H13Q5T200 1668 aaKnown RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 ABCA6Q8N139 1617 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 TRIM43BA6NCK2 446 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 CDH16O75309 829 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 PTDSS1P48651 473 aaKnown RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 ABATP80404 500 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 TTLL4Q14679 1199 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 C12orf60Q5U649 245 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 FAM20AQ96MK3 541 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 FAM111AQ96PZ2 611 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 ISCUQ9H1K1 167 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 TMEM161AQ9NX61 479 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 ATP9BO43861 1147 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 ZNF862O60290 1169 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 RTN2O75298 545 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 ATP2C1P98194 919 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 RALGDSQ12967 914 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 WASHC2DQ5SRD0 308 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 ATPAF2Q8N5M1 289 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 AGAP3Q96P47 875 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 ABCA8O94911 1581 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 C5orf58C9J3I9 102 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 PLEKP08567 350 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 SLC34A1Q06495 639 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 COL23A1Q86Y22 540 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 GUF1Q8N442 669 aaKnown RBP9.04□□□□□ -0.96
CSMD1-206ENST00000520002 STK32AQ8WU08 396 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 CEP44Q9C0F1 390 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 POLR1BQ9H9Y6 1135 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 PLEKHA5Q9HAU0 1116 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 RFX7Q2KHR2 1363 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 SUPT3HB4E1H0 165 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 TRIQKQ629K1 86 aa9.04□□□□□ -0.96
CSMD1-206ENST00000520002 SLC16A3O15427 465 aaKnown RBP9.03□□□□□ -0.96
CSMD1-206ENST00000520002 RPS6KA3P51812 740 aa9.03□□□□□ -0.96
CSMD1-206ENST00000520002 CDK17Q00537 523 aa9.03□□□□□ -0.96
CSMD1-206ENST00000520002 RBM44Q6ZP01 1051 aaKnown RBP9.03□□□□□ -0.96
CSMD1-206ENST00000520002 ZSCAN18Q8TBC5 510 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-206ENST00000520002 BTN2A2Q8WVV5 523 aa9.03□□□□□ -0.96
CSMD1-206ENST00000520002 NPHP4O75161 1426 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-206ENST00000520002 GOLGA8TH3BQL2 631 aa9.03□□□□□ -0.96
CSMD1-206ENST00000520002 BNC2Q6ZN30 1099 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-206ENST00000520002 FUKQ8N0W3 1084 aa9.03□□□□□ -0.96
CSMD1-206ENST00000520002 GIPC3Q8TF64 312 aa9.03□□□□□ -0.96
CSMD1-206ENST00000520002 MMP19Q99542 508 aa9.03□□□□□ -0.96
CSMD1-206ENST00000520002 OSBPL10Q9BXB5 764 aa9.03□□□□□ -0.96
CSMD1-206ENST00000520002 AFDNP55196 1824 aaKnown RBP9.03□□□□□ -0.96
CSMD1-206ENST00000520002 MAGEA4P43358 317 aa9.03□□□□□ -0.96
CSMD1-206ENST00000520002 RCAN1P53805 252 aa9.03□□□□□ -0.96
CSMD1-206ENST00000520002 EFHC1Q5JVL4 640 aa9.03□□□□□ -0.96
CSMD1-206ENST00000520002 ARID3BQ8IVW6 561 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms