RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 PRF1P14222 555 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 HNF1BP35680 557 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 MATKP42679 507 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 ACADVLP49748 655 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 USP11P51784 963 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 TRAF1Q13077 416 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 PTPAQ15257 358 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 ARL13BQ3SXY8 428 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 MTERF2Q49AM1 385 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 KCNT1Q5JUK3 1230 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 ANKS3Q6ZW76 656 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 SGMS1Q86VZ5 419 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 RGL4Q8IZJ4 473 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 TTC9BQ8N6N2 239 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 C1orf216Q8TAB5 229 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 PI4K2BQ8TCG2 481 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 OTUD7AQ8TE49 926 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 DNASE2BQ8WZ79 361 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 ERLEC1Q96DZ1 483 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 FAM167AQ96KS9 214 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 SLC6A17Q9H1V8 727 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 ATXN3LQ9H3M9 355 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 TASP1Q9H6P5 420 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 ASCL3Q9NQ33 180 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 THG1LQ9NWX6 298 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 BCCIPQ9P287 314 aaKnown RBP eCLIP7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 TPCN1Q9ULQ1 816 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 CYP8B1Q9UNU6 501 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 PCDHA10Q9Y5I2 948 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 MED13Q9UHV7 2174 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 PLXND1Q9Y4D7 1925 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 A0A1W2PNU3 283 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 hCG_1642624A0A1W2PR95 340 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 IPO5O00410 1097 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 ALDH1A2O94788 518 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 MPOP05164 745 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 PSAPP07602 524 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 SRGAP2CP0DJJ0 459 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 BMP2P12643 396 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 GABRR2P28476 465 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 KIR2DL1P43626 348 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 IL9RQ01113 521 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 ELAVL2Q12926 359 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 SRSF6Q13247 344 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 KIF19Q2TAC6 998 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 IFIT1BQ5T764 474 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 LMBRD2Q68DH5 695 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 SLC36A4Q6YBV0 504 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 CYB5R4Q7L1T6 521 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 TMEM150AQ86TG1 271 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 IQCA1Q86XH1 822 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 PGBD3Q8N328 593 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 DCBLD1Q8N8Z6 715 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 ZSCAN1Q8NBB4 408 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 LRRN4Q8WUT4 740 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 SLC7A3Q8WY07 619 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 FAM20AQ96MK3 541 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 SEMA3CQ99985 751 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 ARHGAP9Q9BRR9 750 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 NIFKQ9BYG3 293 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 LINC00597Q9H2U6 94 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 FAM124BQ9H5Z6 455 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 GOLGA2P5Q9HBQ8 144 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 NRBP2Q9NSY0 501 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 AFF4Q9UHB7 1163 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 PCDHGA1Q9Y5H4 931 aa7.49□□□□□ -1.21
CTNNA1-216ENST00000519489 A0A1B0GTW7 788 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 SPDYE3A6NKU9 549 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 TMEM189-UBE2V1I3L0A0 370 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 MAN1A2O60476 641 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 RFPL3O75679 317 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 B3GAT3O94766 335 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 NPTXRO95502 500 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 CER1O95813 267 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 CLDN1O95832 211 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 PCP11498 1178 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 ARF4P18085 180 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 GLDCP23378 1020 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 GRK6P43250 576 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 SLC6A11P48066 632 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 CLCNKBP51801 687 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 CDC42EP1Q00587 391 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 CLCA4Q14CN2 919 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 EML3Q32P44 896 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 ZKSCAN2Q63HK3 967 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 TPGS2Q68CL5 300 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 LAYNQ6UX15 382 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 SRGAP1Q7Z6B7 1085 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 DNAJB7Q7Z6W7 309 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 PLA2G4DQ86XP0 818 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 CMTM8Q8IZV2 173 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 ELMOD1Q8N336 334 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 BEST2Q8NFU1 509 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 PRPF31Q8WWY3 499 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 CRYGNQ8WXF5 182 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 GJA10Q969M2 543 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 TMEM143Q96AN5 459 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 VCPIP1Q96JH7 1222 aa7.48□□□□□ -1.21
CTNNA1-216ENST00000519489 ZNF578Q96N58 590 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms